New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1440443	16 (0.440)	6 (0.180)	6/240	2.9	28.5%	coding (342/3525 nt)	pfo	pyruvate‑flavodoxin oxidoreductase
	?	NC_000913	= 1440464	15 (0.440)					coding (321/3525 nt)	pfo	pyruvate‑flavodoxin oxidoreductase

GTCGCGATTTGCGAAATGAGAGCAAAGTCTTGCGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCTGGCGCACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCT  >  NC_000913/1440318‑1440605                                                                                                                                                   |                                                                                                                                              gTCGCGATTTGCGAAATGAGAGCAAAGTCTTGCGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCTGGCGCACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTac                                                                                                                                             >  8:149749‑M2/1‑147 (MQ=255)       aTTTGCGAAATGAGAGCAAAGTCTTGCGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCTGGCGCACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAg                                                                                                                                       <  6:148075/149‑1 (MQ=255)                                                     cacacaACATCGCGCAACCCGTCTGGCGCACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACa                                                                                                    <  8:25472/138‑1 (MQ=255)                                                     cacacaACATCGCGCAACCCGTCTGGCGCACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACa                                                                                                    >  7:25472/1‑138 (MQ=255)                                                     cacacaACATCGCGCAACCCGTCTGGCGCACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGat                                                                                          <  3:39716/148‑1 (MQ=255)                                                        acaacaTCGCGCAACCCGTCTGGCGCACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTacatgca                                                                                                                                        <  1:130428‑M2/99‑8 (MQ=255)                                                        acaacaTCGCGCAACCCGTCTGGCGCACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTacatgca                                                                                                                                        >  2:130428‑M2/1‑92 (MQ=255)                                                             aTCGCGCAACCCGTCTGGCGCACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATcagcag                                                                                 <  2:143127/149‑1 (MQ=255)                                                              tCGCGCAACCCGTCTGGCGCACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATcagcag                                                                                 >  6:47821/1‑148 (MQ=255)                                                                    aaCCCGTCTGGCGCACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAAccc                                                                          >  1:34569/1‑149 (MQ=255)                                                                       ccGTCTGGCGCACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGc                                                                       >  1:12186/1‑149 (MQ=255)                                                                                gcACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGt                                                               >  6:17029/1‑148 (MQ=255)                                                                                   ccGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAAc                                                           <  5:17029/149‑1 (MQ=255)                                                                                          aaCGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGtt                                                     >  8:71751/1‑148 (MQ=255)                                                                                                                    agagTGCATGTGTGGCAACGGTACGTGCCGCTacatgcactctctatttttggcgatcattccgacgttatggcggtgcgccagacgggttgcgcgatgttgtgtgcagcaaacgtccaggaagcgcaagactttgctctcatttcgc                           <  5:69346‑M2/148‑117 (MQ=255)                                                                                                                       gTGCATGTGTGGCAACGGTACGTGCCGCTacatgcactctctatttttggcgatcattccgacgttatggcggtgctccagacgggttgcgcgatgttgtgtgcagcaaacgtccaggaagcgcacgacttttctctcatttcgcaaat                       <  8:134869‑M2/149‑121 (MQ=255)                                                                                                                        tGCATGTGTGGCAACGGTACGTGCCGCTacatgcactctctatttttggcgatcattccgacgttatggcggtgcgccagacgggttgcgcgatgttgtgtgcagcaaacgtccaggaagcgcaagactttgctctcatttcgcaaatc                      <  4:61614‑M2/149‑122 (MQ=255)                                                                                                                           aTGTGTGGCAACGGTACGTGCCGCTacatgcactctctatttttggcgatcattccgacgttatggcggtgcgccagacgggttgcgcgatgttgtgtgc                                                                    <  2:67946‑M2/100‑76 (MQ=255)                                                                                                                           aTGTGTGGCAACGGTACGTGCCGCTacatgcactctctatttttggcgatcattccgacgttatggcggtgcgccagacgggttgcgcgatgttgtgtgc                                                                    >  1:67946‑M2/1‑25 (MQ=255)                                                                                                                            tgtgtgGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGt                  <  2:12186/149‑1 (MQ=255)                                                                                                                              tgtgGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTa                 <  7:71751/148‑1 (MQ=255)                                                                                                                                tgGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGc               <  2:34569/148‑1 (MQ=255)                                                                                                                                           cGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGc   <  5:47821/149‑1 (MQ=255)                                                                                                                                            gTGCCGCTacatgcactctctatttttggcgatcattccgacgttatggcggtgcgccagacgggttgcgcgatgttgtgtgcagcaaacgtccaggaagcgcaagactttgctctcatttcgcaaatcgcgacgctgaaaagccgcgt  >  3:61614‑M2/1‑8 (MQ=255)                                                                                                                                                   |                                                                                                                                              GTCGCGATTTGCGAAATGAGAGCAAAGTCTTGCGCTTCCTGGACGTTTGCTGCACACAACATCGCGCAACCCGTCTGGCGCACCGCCATAACGTCGGAATGATCGCCAAAAATAGAGAGTGCATGTGTGGCAACGGTACGTGCCGCTACATGCAGGACAAACGGTGTTAGTTCGCCTGCCAGTTTGTACAGCGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCT  >  NC_000913/1440318‑1440605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.