Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,366,751 Δ1,271 bp IS5‑mediated [yhcE][yhcG] [yhcE], yhcF, [yhcG]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3365642–3366755 3368021 1267–2380 51 [47] [0] 141 insH1–[yhcG] insH1,yhcE,yhcF,[yhcG]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3366750NA (NA)138 (1.050) 93/260 0.2 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 3368022 = 0 (0.000)coding (196/1128 nt) yhcG DUF1016 family protein in the PD‑(D/E)XK nuclease superfamily

Only 100 of 138 total aligned reads displayed.

CAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3366608‑3366750
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGG  >  NC_000913/3368022‑3368166
                                                                                                                                                                                                                                                                                                
CAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATC                                                                                                                                             <  7:547166/149‑1
            TTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATC                                                                                                                                  >  7:621818/1‑148
                  GGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGAT                                                                                                                           >  6:174358/1‑149
                    TCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTT                                                                                                                         <  1:2641/149‑1
                      TGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTAT                                                                                                                       >  4:74891/1‑149
                       cctatctCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACGTGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTAT                                                                                                                       <  5:194804/141‑1
                       GACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATG                                                                                                                      >  5:85957/1‑149
                        ACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTAT                                                                                                                       <  8:622123/147‑1
                        ACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTAT                                                                                                                       <  3:74891/147‑1
                        ACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTAT                                                                                                                       <  7:17018/147‑1
                             GCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAG                                                                                                                <  8:544762/149‑1
                             GCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAG                                                                                                                <  7:279851/149‑1
                             GCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAG                                                                                                                <  5:49429/149‑1
                              CTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTTCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGG                                                                                                               <  4:165311/149‑1
                               TTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGG                                                                                                               >  6:35388/1‑148
                               TTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGG                                                                                                               >  8:487748/1‑148
                                 ACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTA                                                                                                             <  8:621818/148‑1
                                   TGCTGAATTGACTGTCGGCGAAGTTAAGTTGATGAGTCATGATGAACCCTGTTCTATTGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTAT                                                                                                                       <  4:180131/136‑1
                                   TGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAG                                                                                                                >  5:247729/1‑143
                                   TGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAG                                                                                                                <  6:247729/143‑1
                                   TGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGAT                                                                                                                           >  4:274282/1‑132
                                   TGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGAT                                                                                                                           <  3:274282/132‑1
                                   TGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTACAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAACAAGCGACTATCAAAGGATTTAa                                                                                                                       >  3:180131/1‑135
                                     CTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGAC                                                                                                                                      <  3:130289/119‑1
                                        AATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTG                                                                                                     <  3:532408/149‑1
                                          TTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGG                                                                                                   >  5:532434/1‑149
                                             ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAG                                                                                                                >  7:603893/1‑133
                                               TGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTC                                                                                              >  8:403904/1‑149
                                               TGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTC                                                                                              >  2:395872/1‑149
                                               TGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGG                                                                                                    >  5:547037/1‑143
                                               TGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAT                                                                                                                                              >  5:102236/1‑101
                                               TGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAT                                                                                                                                              <  6:102236/101‑1
                                                    GCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCGGGGACTTGTTCGCACCTTCCCTAATC                                                                                                                                             <  5:273930/97‑1
                                                    GCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCGGGGACTTGTTCGCACCTTCCCTAATC                                                                                                                                             >  6:273930/1‑97
                                                      GAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAA                                                                                        >  3:280524/1‑148
                                                             AGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTAC                                                                                <  5:35388/149‑1
                                                             AGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTA                                                                                 <  6:85957/148‑1
                                                              GTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACG                                                                               >  6:327659/1‑149
                                                              GTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTG                                                                                            >  3:423865/1‑136
                                                              GTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAG                                                                                                                <  1:362235/116‑1
                                                              GTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAG                                                                                                                >  2:362235/1‑116
                                                               TTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGC                                                                              <  2:52267/149‑1
                                                                       TCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAG                                                                      >  4:23877/1‑149
                                                                       TCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTG                                                                                                     <  4:433853/118‑1
                                                                               AACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGGACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTT                                                               <  1:574921/148‑1
                                                                                ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTA                                                             <  8:591814/149‑1
                                                                                ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTA                                                             >  7:137122/1‑149
                                                                                 CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTAC                                                            >  8:444280/1‑149
                                                                                  CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACC                                                           >  2:257266/1‑149
                                                                                  CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTAC                                                            >  7:538533/1‑148
                                                                                    TGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCT                                                                                               <  4:232240/111‑1
                                                                                        CTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATGAAGC                                                                                                                                         <  1:539558/65‑1
                                                                                        CTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGC                                                                                                                                         >  2:539558/1‑65
                                                                                         TATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTACAAAAAACTTACGCCAAATGAGGCTTTTTTAC                                                            >  8:486986/1‑141
                                                                                         TATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTACAAAAAACTTACGCCAAATGAGGCTTTTTTAC                                                            <  7:486986/141‑1
                                                                                             GCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAA                                                <  3:23877/149‑1
                                                                                             GCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAA                                                <  1:395872/149‑1
                                                                                               TCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTAGGTCTATGGTATAAGCGTGGGTTCTCTGCAAAAAGCTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACA                                              >  6:308691/1‑149
                                                                                               TCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTGCCCTAATCAAGCGACTATCAAAGGATGTATGTCTAAGGGATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACA                                              >  4:516711/1‑149
                                                                                                 CAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACA                                              <  7:444280/147‑1
                                                                                                 CAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAG                                                                                                                <  2:128711/81‑1
                                                                                                 CAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAG                                                                                                                >  1:128711/1‑81
                                                                                                     TGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTG                                         >  8:244979/1‑148
                                                                                                       ACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAA                                       <  8:137122/148‑1
                                                                                                        CAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTAAGTCTAAGGTATAAGCTTGGGTACTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTAAACATGTTGAAA                                      >  5:64539/1‑148
                                                                                                         AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATT                                    >  3:238433/1‑149
                                                                                                           ACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTG                                                                                            >  1:107365/1‑91
                                                                                                           ACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTG                                                                                            <  2:107365/91‑1
                                                                                                                 TCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACAT                                             >  6:13740/1‑132
                                                                                                                 TCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACAT                                             <  5:13740/132‑1
                                                                                                                 TCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTAC                                                                                <  7:447210/97‑1
                                                                                                                 TCTCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGT                                                                                                      <  7:321304/75‑1
                                                                                                                  CTCATATCAGGGACATGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGCATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTATTACCTCTTTTTTCAACATGTTGAAATTCACCAGAa                            >  4:161444/1‑147
                                                                                                                   TCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAA                          >  2:115168/1‑149
                                                                                                                   TCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAACTCACCAGACAA                          >  2:624095/1‑149
                                                                                                                   TCATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGATTTTTTACCTCTTTTTTCAACATGTTTAAATTCACCAGACAA                          >  4:289046/1‑149
                                                                                                                     ATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATG                        >  3:488480/1‑149
                                                                                                                     ATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTT                                                                >  3:352561/1‑109
                                                                                                                     ATATCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTT                                                                <  4:352561/109‑1
                                                                                                                      TATCAGTGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGT                       <  8:14588/149‑1
                                                                                                                        TCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCT                     >  3:167260/1‑149
                                                                                                                        TCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCT                     >  7:551738/1‑149
                                                                                                                        TCAGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTC                      <  1:100208/148‑1
                                                                                                                          AGGGACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTGTGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGG                   >  8:376259/1‑149
                                                                                                                              ACTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAA               >  5:366118/1‑149
                                                                                                                               CTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGG                   <  3:392052/144‑1
                                                                                                                               CTTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGG                   >  4:392052/1‑144
                                                                                                                                TTGTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAAT              >  6:45775/1‑148
                                                                                                                                  GTTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATT             <  4:488480/147‑1
                                                                                                                                   TTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTGTGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAAC          <  7:376259/149‑1
                                                                                                                                   TTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAAC          <  7:244979/149‑1
                                                                                                                                   TTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAA           <  5:174358/148‑1
                                                                                                                                   TTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAA           <  1:257266/148‑1
                                                                                                                                   TTCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGG                                                                     <  5:327050/90‑1
                                                                                                                                    TCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAA               >  2:461892/1‑143
                                                                                                                                    TCGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAA               <  1:461892/143‑1
                                                                                                                                     CGCACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCGCCAGACATTGTCTGGTGAATTtcaa         <  1:533773/148‑5
                                                                                                                                        ACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACC                                >  3:234490/1‑122
                                                                                                                                        ACCTTCCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACC                                <  4:234490/122‑1
                                                                                                                                             CCCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGG  <  8:551738/147‑1
                                                                                                                                                                                                                                                                                                
CAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3366608‑3366750
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGG  >  NC_000913/3368022‑3368166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.