Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,366,751 Δ1,271 bp IS5‑mediated [yhcE][yhcG] [yhcE], yhcF, [yhcG]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3365642–3366755 3368021 1267–2380 51 [47] [0] 141 insH1–[yhcG] insH1,yhcE,yhcF,[yhcG]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3366750NA (NA)138 (1.050) 93/260 0.2 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 3368022 = 0 (0.000)coding (196/1128 nt) yhcG DUF1016 family protein in the PD‑(D/E)XK nuclease superfamily

Only 100 of 141 total aligned reads displayed.

TTATTCATCTGGTCGATAGCGCCCGGACGGAAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCAGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAA  >  NC_000913/3367882‑3368169
                                                                                                                                            |                                                                                                                                                   
gaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggcttcagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAg                                                                                                                                             >  3:165311‑M2/141‑149 (MQ=255)
               ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGAt                                                                                                                              >  6:174358‑M2/126‑149 (MQ=255)
                 tctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGAttt                                                                                                                            <  1:2641‑M2/26‑1 (MQ=255)
                   tgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTAt                                                                                                                          >  4:74891‑M2/122‑149 (MQ=255)
                    gacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATg                                                                                                                         >  5:85957‑M2/121‑149 (MQ=255)
                     acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTAt                                                                                                                          <  8:622123‑M2/28‑1 (MQ=255)
                     acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTAt                                                                                                                          <  3:74891‑M2/28‑1 (MQ=255)
                          gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAg                                                                                                                   <  7:279851‑M2/35‑1 (MQ=255)
                          gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAg                                                                                                                   <  5:49429‑M2/35‑1 (MQ=255)
                           cttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggcttcagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAgg                                                                                                                  <  4:165311‑M2/36‑1 (MQ=255)
                            ttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacgtgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGCCTATCAAAGGATTTAt                                                                                                                          >  6:194804‑M2/113‑140 (MQ=255)
                            ttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAgg                                                                                                                  >  8:487748‑M2/113‑148 (MQ=255)
                            ttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAgg                                                                                                                  >  6:35388‑M2/113‑148 (MQ=255)
                             tactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGta                                                                                                                >  3:256791‑M2/112‑149 (MQ=255)
                              actgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGta                                                                                                                <  8:621818‑M2/38‑1 (MQ=255)
                                tgctgaattgactgtcggcgaagttaagttgatgagtcatgatgaaccctgttctattgctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTAt                                                                                                                          <  4:180131‑M2/28‑1 (MQ=255)
                                tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGAt                                                                                                                              >  4:274282‑M2/109‑132 (MQ=255)
                                tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAg                                                                                                                   >  5:247729‑M2/109‑143 (MQ=255)
                                tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctacagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAACAAGCGACTATCAAAGGATTtaa                                                                                                                          >  3:180131‑M2/109‑135 (MQ=255)
                                  ctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGAc                                                                                                                                         <  3:130289‑M2/13‑1 (MQ=255)
                                   tgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGa                                                                                                                                          >  2:394382‑M2/106‑117 (MQ=255)
                                   tgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGa                                                                                                                                          <  1:394382‑M2/12‑1 (MQ=255)
                                    gaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGt                                                                                                         >  7:591814‑M2/105‑149 (MQ=255)
                                     aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTg                                                                                                        <  3:532408‑M2/46‑1 (MQ=255)
                                          actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAg                                                                                                                   >  7:603893‑M2/99‑133 (MQ=255)
                                            tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAt                                                                                                                                                 <  6:102236‑M2/5‑1 (MQ=255)
                                            tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTgg                                                                                                       >  5:547037‑M2/97‑143 (MQ=255)
                                            tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTtctc                                                                                                 >  8:403904‑M2/97‑149 (MQ=255)
                                            tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTtctc                                                                                                 >  2:395872‑M2/97‑149 (MQ=255)
                                                 gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcggggacttgttcgcaccttccCTAATc                                                                                                                                                >  6:273930‑M2/92‑97 (MQ=255)
                                                   gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCaaa                                                                                           >  3:280524‑M2/90‑148 (MQ=255)
                                                          agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTa                                                                                    <  6:85957‑M2/66‑1 (MQ=255)
                                                          agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTAc                                                                                   <  5:35388‑M2/67‑1 (MQ=255)
                                                           gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTg                                                                                               <  4:423865‑M2/55‑1 (MQ=255)
                                                           gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTg                                                                                               >  3:423865‑M2/82‑136 (MQ=255)
                                                                  actcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAAt                                                                            >  7:14588‑M2/75‑148 (MQ=255)
                                                                   ctcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGa                                                                          <  7:487748‑M2/76‑1 (MQ=255)
                                                                    tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTg                                                                                                        <  4:433853‑M2/46‑1 (MQ=255)
                                                                    tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAg                                                                         >  4:23877‑M2/73‑149 (MQ=255)
                                                                          tgaacactgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCtttt                                                                   >  2:100208‑M2/67‑149 (MQ=255)
                                                                             accctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTa                                                                >  7:137122‑M2/64‑149 (MQ=255)
                                                                             accctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTa                                                                <  8:591814‑M2/86‑1 (MQ=255)
                                                                              ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTAc                                                               >  8:444280‑M2/63‑149 (MQ=255)
                                                                               cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTAcc                                                              >  2:257266‑M2/62‑149 (MQ=255)
                                                                               cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTAc                                                               <  8:538533‑M2/87‑1 (MQ=255)
                                                                               cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTAc                                                               >  7:538533‑M2/62‑148 (MQ=255)
                                                                                 tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTtct                                                                                                  <  4:232240‑M2/52‑1 (MQ=255)
                                                                                 tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTtct                                                                                                  >  3:232240‑M2/60‑111 (MQ=255)
                                                                                     ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATGAAGc                                                                                                                                            <  1:539558‑M2/10‑1 (MQ=255)
                                                                                     ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGc                                                                                                                                            >  2:539558‑M2/56‑65 (MQ=255)
                                                                                      tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGa                                                                                                                               >  4:307112‑M2/55‑77 (MQ=255)
                                                                                      tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGa                                                                                                                               <  3:307112‑M2/23‑1 (MQ=255)
                                                                                      tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTACAAAAAACTTACGCCAAATGAGGCTTTTTTAc                                                               >  8:486986‑M2/55‑141 (MQ=255)
                                                                                          gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCaa                                                   <  3:23877‑M2/99‑1 (MQ=255)
                                                                                          gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCaa                                                   <  1:395872‑M2/99‑1 (MQ=255)
                                                                                           ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGt                                                                                                                        >  6:117097‑M2/50‑79 (MQ=255)
                                                                                           ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGt                                                                                                                        <  5:117097‑M2/30‑1 (MQ=255)
                                                                                            tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTAGGTCTATGGTATAAGCGTGGGTTCTCTGCAAAAAGCTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACa                                                 >  6:308691‑M2/49‑149 (MQ=255)
                                                                                              cagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAg                                                                                                                   >  1:128711‑M2/47‑81 (MQ=255)
                                                                                              cagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACa                                                 <  7:444280‑M2/101‑1 (MQ=255)
                                                                                                  tgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTg                                            >  8:244979‑M2/43‑148 (MQ=255)
                                                                                                    acaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGaaa                                         <  2:235546‑M2/109‑1 (MQ=255)
                                                                                                    acaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGaa                                          <  8:137122‑M2/108‑1 (MQ=255)
                                                                                                     caaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAAt                                        <  5:327659‑M2/110‑1 (MQ=255)
                                                                                                        acatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTg                                                                                               >  1:107365‑M2/37‑91 (MQ=255)
                                                                                                        acatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTg                                                                                               <  2:107365‑M2/55‑1 (MQ=255)
                                                                                                              tctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGt                                                                                                         >  8:321304‑M2/31‑75 (MQ=255)
                                                                                                              tctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGt                                                                                                         <  7:321304‑M2/45‑1 (MQ=255)
                                                                                                              tctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTAc                                                                                   <  7:447210‑M2/67‑1 (MQ=255)
                                                                                                              tctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACAt                                                <  5:13740‑M2/102‑1 (MQ=255)
                                                                                                              tctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCGCCAGa                                >  2:533773‑M2/31‑148 (MQ=255)
                                                                                                               ctcatatcagggacatgttcgcaccttccCTAATCAAGCGACTATCAAAGCATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTATTACCTCTTTTTTCAACATGTTGAAATTCACCAgaa                               >  4:161444‑M2/30‑147 (MQ=255)
                                                                                                                tcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACaa                             >  2:115168‑M2/29‑149 (MQ=255)
                                                                                                                tcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACaa                             >  5:24005‑M2/29‑149 (MQ=255)
                                                                                                                  atatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCtttt                                                                   <  4:352561‑M2/83‑1 (MQ=255)
                                                                                                                  atatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATg                           >  3:488480‑M2/27‑149 (MQ=255)
                                                                                                                     tcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTc                         <  1:100208‑M2/125‑1 (MQ=255)
                                                                                                                     tcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCt                        >  7:551738‑M2/24‑149 (MQ=255)
                                                                                                                       agggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGt                                              <  7:7851‑M2/104‑1 (MQ=255)
                                                                                                                            cttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTgg                      <  3:392052‑M2/128‑1 (MQ=255)
                                                                                                                             ttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAAt                 >  6:45775‑M2/16‑148 (MQ=255)
                                                                                                                               gttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAAtt                <  4:488480‑M2/134‑1 (MQ=255)
                                                                                                                                ttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTGTGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAac             <  7:376259‑M2/137‑1 (MQ=255)
                                                                                                                                ttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAgg                                                                        <  5:327050‑M2/78‑1 (MQ=255)
                                                                                                                                ttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAgg                                                                        >  6:327050‑M2/13‑90 (MQ=255)
                                                                                                                                ttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTaa              >  5:604773‑M2/13‑148 (MQ=255)
                                                                                                                                ttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTaa              <  1:257266‑M2/136‑1 (MQ=255)
                                                                                                                                ttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTaa              <  5:174358‑M2/136‑1 (MQ=255)
                                                                                                                                ttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAac             <  7:244979‑M2/137‑1 (MQ=255)
                                                                                                                                 tcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGaa                  >  2:461892‑M2/12‑143 (MQ=255)
                                                                                                                                 tcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGaa                  <  1:461892‑M2/132‑1 (MQ=255)
                                                                                                                                 tcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTGTCAACATGTTGAAATTCACCAGACAATGTATGGCGAATTAaca            >  4:55628‑M2/12‑149 (MQ=255)
                                                                                                                                  cgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCGCCAGACATTGTCTGGtgaatttcaa            <  1:533773‑M2/138‑5 (MQ=255)
                                                                                                                                     accttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCAcc                                   >  3:234490‑M2/8‑122 (MQ=255)
                                                                                                                                     accttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCAcc                                   <  4:234490‑M2/115‑1 (MQ=255)
                                                                                                                                       cttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTg      <  5:45775‑M2/144‑1 (MQ=255)
                                                                                                                                          ccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTgg     <  8:551738‑M2/145‑1 (MQ=255)
                                                                                                                                            cTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTgg     <  8:329205/145‑1 (MQ=255)
                                                                                                                                            cTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTgg     >  7:329205/1‑145 (MQ=255)
                                                                                                                                            cTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATCTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGaa  >  3:286828/1‑148 (MQ=255)
                                                                                                                                            |                                                                                                                                                   
TTATTCATCTGGTCGATAGCGCCCGGACGGAAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCAGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAA  >  NC_000913/3367882‑3368169

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: