Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,368,899 IS2 (–) +5 bp coding (1073‑1077/1128 nt) yhcG → DUF1016 family protein in the PD‑(D/E)XK nuclease superfamily

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3186096 =NA (NA)36 (1.010) 29/262 0.4 100% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 3368899 = 0 (0.000)coding (1073/1128 nt) yhcG DUF1016 family protein in the PD‑(D/E)XK nuclease superfamily
* ? NC_000913 = 3187426NA (NA)33 (0.920) 25/262 0.6 100% noncoding (1331/1331 nt) IS2 repeat region
?NC_000913 = 3368903 0 (0.000)coding (1077/1128 nt) yhcG DUF1016 family protein in the PD‑(D/E)XK nuclease superfamily

CTACCGGATGAAAATCCGCCCATCGGTCTGGTTCTCTGTGCAGAGAAAGGAGCCGGAGAAGCGCATTATGCTCTGGCAGGTTTGCCTAACACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGTTTCGAATTCTGCAGACAGTGTCTGCAGAATCTTTAAAACGAACTAAGTTTTAAGCCATTAAATCAGCCTTAACCTTCACCACAACC  >  NC_000913/3368757‑3369050
                                                                                                                                                  |                                                                                                                                                   
ttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAt                                                                                                                                                     <  5:35853‑M2/5‑1 (MQ=255)
ttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATg                                                                                                                                                    >  1:37622‑M2/143‑148 (MQ=255)
   ctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggcgccagtctaCAGATGAACt                                                                                                                                                >  7:60580‑M2/140‑149 (MQ=255)
        tggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGtt                                                                                                                                            <  1:29511‑M2/14‑1 (MQ=255)
           tacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGaa                                                                                                                                        <  1:70194‑M2/18‑1 (MQ=255)
                 gCCCATCGGTCTGGTTCTCTGTGCAGAGAAAGGAGCCGGAGAAGCGCATTATGCTCTGGCAGGTTTGCCTACCACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatttgcccc                                                                                                                                         <  7:18721‑M2/142‑13 (MQ=255)
                 gCCCATCGGTCTGGTTCTCTGTGCAGAGAAAGGAGCCGGAGAAGCGCATTATGCTCTGGCAGGTTTGCCTAACACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatttgcccc                                                                                                                                         >  8:18721‑M2/1‑130 (MQ=255)
                  cccATCGGTCTGGTTCTCTGTGCAGAGAAAGGAGCCGGAGAAGCGCATTATGCTCTGGCAGGTTTGCCTAACACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatttgcccctatatttc                                                                                                                                 >  2:80708‑M2/1‑129 (MQ=255)
                     aTCGGTCTGGTTCTCTGTGCAGAGAAAGGAGCCGGAGAAGCGCATTATGCTCTGGCAGGTTTGCCTAACACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatt                                                                                                                                               >  1:151023‑M2/1‑126 (MQ=255)
                     aTCGGTCTGGTTCTCTGTGCAGAGAAAGGAGCCGGAGAAGCGCATTATGCTCTGGCAGGTTTGCCTAACACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatt                                                                                                                                               <  2:151023‑M2/132‑7 (MQ=255)
                      tCGGTCTGGTTCTCTGTGCAGAGAAAGGAGCCGGAGAAGCGCATTATGCTCTGGCAGGTTTGCCTAACACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatttgcccctatatttccaga                                                                                                                             >  2:173081‑M2/1‑125 (MQ=255)
                            tccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTagag                                                                                                                       >  3:32937‑M2/115‑149 (MQ=255)
                            tccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTagag                                                                                                                       >  2:84279‑M2/115‑149 (MQ=255)
                              gTTCTCTGTGCAGAGAAAGGAGCCGGAGAAGCGCATTATGCTCTTGCAGGTTTGCCTAACACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatttgcccctatatttccagacatctg                                                                                                                       >  3:9085‑M2/1‑117 (MQ=255)
                                    taagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCta                                                                                                               >  6:156286‑M2/107‑149 (MQ=255)
                                        acatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAgg                                                                                                                  <  7:46000‑M2/40‑1 (MQ=255)
                                        acatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAgg                                                                                                                  >  8:46000‑M2/103‑142 (MQ=255)
                                           agaAAGGAGCCGGAGAAGCGCATTATGCTCTGGCAGGTTTGCCTAACACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatttgcccctatatttccagacatctgttatc                                                                                                                  >  1:8500‑M2/1‑104 (MQ=255)
                                           agaAAGGAGCCGGAGAAGCGCATTATGCTCTGGCAGGTTTGCCTAACACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatttgcccctatatttccagacatctgttatc                                                                                                                  <  2:8500‑M2/139‑36 (MQ=255)
                                                 atctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTaa                                                                                                  <  5:14937‑M2/56‑1 (MQ=255)
                                                         tccaatgactagactaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCg                                                                                          >  2:148648‑M2/86‑149 (MQ=255)
                                                           caatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGTCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGt                                                                                        >  7:64566‑M2/84‑149 (MQ=255)
                                                           caatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGc                                                                                           <  4:32937‑M2/63‑1 (MQ=255)
                                                                  tagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAAcaca                                                                                                                                    <  8:92400‑M2/22‑1 (MQ=255)
                                                                  tagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAAcaca                                                                                                                                    >  7:92400‑M2/77‑98 (MQ=255)
                                                                   aTGCTCTGGCAGGTTTGCCTAACACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCGGATtgg                                                                                                                                                  <  2:154917‑M2/83‑4 (MQ=255)
                                                                         aaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGTTTCGAATTCTGCa                                                                           <  2:37622‑M2/79‑1 (MQ=255)
                                                                           gCAGGTTTGCCTAACACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgcggcagatattcccgtgg                                                                        <  1:4240‑M2/149‑78 (MQ=255)
                                                                           gCAGGTTTGCCTAACACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtgg                                                                        <  8:58719‑M2/149‑78 (MQ=255)
                                                                              tagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGTTTCGAATTCTGCAGacact                                                                     >  8:66067‑M2/65‑147 (MQ=255)
                                                                                gtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAg                                                                                            >  6:137627‑M2/63‑124 (MQ=255)
                                                                                  attaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGtt                                                                                                                                            <  2:61689‑M2/14‑1 (MQ=255)
                                                                                  attaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGtt                                                                                                                                            >  1:61689‑M2/61‑74 (MQ=255)
                                                                                  attaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGTTTCGAATTCTGCAGACAGTGTCt                                                                 >  8:113038‑M2/61‑149 (MQ=255)
                                                                                   ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGTTTCGAATTCTGc                                                                            >  4:129610‑M2/60‑137 (MQ=255)
                                                                                   ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGTTTCGAATTCTGc                                                                            <  3:129610‑M2/78‑1 (MQ=255)
                                                                                   ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGTTTCGAATTCTGCAGACAGTGTCt                                                                 <  8:64566‑M2/89‑1 (MQ=255)
                                                                                     aagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGTTTCGAATTCTGCAGACAGTGTCTGc                                                               <  5:156286‑M2/91‑1 (MQ=255)
                                                                                      tAACACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatttgcccctatatttccagacagctgttatcaattaacccattacaagcccgctgccgcagatattcccgtggcgagcgagaac                                                             <  8:109971‑M2/149‑89 (MQ=255)
                                                                                      tAACACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatttgcccctatatttccagac                                                                                                                            >  8:30038‑M2/1‑61 (MQ=255)
                                                                                      tAACACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatttgcccctatatttccagac                                                                                                                            <  7:30038‑M2/86‑26 (MQ=255)
                                                                                      agactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGTTTCGAATTCTGCAGACACTGTCTGCAg                                                             <  1:148648‑M2/93‑1 (MQ=255)
                                                                                       caatatcacttaaataagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGTTTCGAATTCTGCAGACAGTGTCTGCAg                                                             >  5:6306‑M2/56‑148 (MQ=255)
                                                                                        actatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGTTTCGAATTCTGCAGACAGTGTCTGCAGaa                                                           <  1:84279‑M2/95‑1 (MQ=255)
                                                                                        actatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGTTTCGAATTCTGCAGACACTGTCTGCAGaa                                                           <  7:66067‑M2/95‑1 (MQ=255)
                                                                                          tatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGTTTCGAATTCTGCAGACAGTGTCTGCAGAATc                                                         >  5:12214‑M2/53‑149 (MQ=255)
                                                                                          acCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccag                                                         <  1:148933‑M2/149‑93 (MQ=255)
                                                                                                      aagtgatattggttgtctggagattcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGTTTCGAATTCTGCAGACAGTGTCTGCAGAATCTTTAAAACGaa                                              <  7:113038‑M2/108‑1 (MQ=255)
                                                                                                       gCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatttgccc                                                                                                                                          <  4:84174‑M2/55‑12 (MQ=255)
                                                                                                       gCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatttgccc                                                                                                                                          >  3:84174‑M2/1‑44 (MQ=255)
                                                                                                        cGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggat                                           >  2:148933‑M2/1‑43 (MQ=255)
                                                                                                         tgatattgggtgtctggagcttcagggggccagtctaCAGATGAACTCGATCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGTTTCGAATTCTGCAGACAGTGTCTGCAGAATCTTTAAAACGAACTaa                                          <  8:60580‑M2/112‑1 (MQ=255)
                                                                                                               aaGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcgga                                            >  8:77770‑M2/1‑36 (MQ=255)
                                                                                                               aaGATGCAACTACCTGATGAGAAACGACTCGCAGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcgga                                            <  7:77770‑M2/141‑106 (MQ=255)
                                                                                                                            attcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGTTTCGAATTCTGCAGACAGTGTCTGCAGAATCTTTAAAACGAACTaa                                          >  2:394‑M2/19‑130 (MQ=255)
                                                                                                                            attcagggggccagtctaCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGTTTCGAATTCTGCAGACAGTGTCTGCAGAATCTTTAAAACGAACTaa                                          <  1:394‑M2/112‑1 (MQ=255)
                                                                                                                               atgaGAAACGACTCGCAGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaac                    >  2:4240‑M2/1‑20 (MQ=255)
                                                                                                                                   gaAACGACTCGCAGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcct                <  3:130027‑M2/149‑134 (MQ=255)
                                                                                                                                    aaaCGACTCGCAGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctc               <  2:18807‑M2/149‑135 (MQ=255)
                                                                                                                                      aCGACTCGCAGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggat                                           >  7:105398‑M2/1‑13 (MQ=255)
                                                                                                                                      aCGACTCGCAGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggat                                           <  8:105398‑M2/119‑107 (MQ=255)
                                                                                                                                               aGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttct    >  4:130027‑M2/1‑4 (MQ=255)
                                                                                                                                                gATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctt   >  7:58719‑M2/1‑3 (MQ=255)
                                                                                                                                                 aTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttcttt  >  2:152713‑M2/1‑2 (MQ=255)
                                                                                                                                                 aTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtg                                                                         >  1:73343‑M2/1‑2 (MQ=255)
                                                                                                                                                 aTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtg                                                                         >  1:75929‑M2/1‑2 (MQ=255)
                                                                                                                                                 aTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtg                                                                         <  2:75929‑M2/78‑77 (MQ=255)
                                                                                                                                                 aTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtg                                                                         <  2:73343‑M2/78‑77 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
CTACCGGATGAAAATCCGCCCATCGGTCTGGTTCTCTGTGCAGAGAAAGGAGCCGGAGAAGCGCATTATGCTCTGGCAGGTTTGCCTAACACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAATTTCAGCGGTTTCGAATTCTGCAGACAGTGTCTGCAGAATCTTTAAAACGAACTAAGTTTTAAGCCATTAAATCAGCCTTAACCTTCACCACAACC  >  NC_000913/3368757‑3369050

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.