| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2878265 | 22 (0.680) | 10 (0.330) | 10/240 | 2.0 | 31.9% | intergenic (+647/+304) | iap/ygbF | aminopeptidase in alkaline phosphatase isozyme conversion/CRISPR adaptation ssRNA endonuclease |
| ? | NC_000913 | = 2878269 | 22 (0.720) | intergenic (+651/+300) | iap/ygbF | aminopeptidase in alkaline phosphatase isozyme conversion/CRISPR adaptation ssRNA endonuclease | |||||
ATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTG > NC_000913/2878118‑2878408 | ataAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGC < 5:12923‑M1/148‑1 (MQ=255) aCGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCgcgg > 3:88690‑M2/1‑143 (MQ=255) ggTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCgccagcgggga < 4:128155‑M1/148‑12 (MQ=255) ggTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCgccagcgggga > 3:128155‑M1/1‑137 (MQ=255) gTTTATCCCCGCTGGCGCGGGGAACCCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAAc > 3:118364/1‑149 (MQ=255) tttATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAAct > 7:43495/1‑149 (MQ=255) tttATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAAct > 5:141144/1‑149 (MQ=255) tttATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAAct > 3:58567/1‑149 (MQ=255) cgGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAAtt < 4:58567/149‑1 (MQ=255) aaCTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAAc < 6:141144/149‑1 (MQ=255) cTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCgccagcggggataaaccgtttggatc > 2:11741‑M1/1‑112 (MQ=255) cTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCgccagcggggataaaccgtttggatc < 1:11741‑M1/138‑27 (MQ=255) tCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCgccagcggggataaac > 6:122853‑M1/1‑111 (MQ=255) tCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCGGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCgccagcggggataaac < 5:122853‑M1/127‑17 (MQ=255) gcAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGttt > 4:102831/1‑148 (MQ=255) gcAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTa > 2:31444/1‑149 (MQ=255) gcgATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGcgc > 5:67914/1‑145 (MQ=255) cgATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGgcg > 8:57164/1‑149 (MQ=255) cgGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCgccagcggggataaaccgtttggatcg < 5:108741‑M1/103‑28 (MQ=255) cgGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCgccagcggggataaaccgtttggatcg > 6:108741‑M1/1‑76 (MQ=255) cgGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGaa < 4:118364/149‑1 (MQ=255) ccGCTGGCGCTGGGAACTCGCGACCGCTCAGAACATCCTGATCCGATCCAAACGGTTTACCCCCGCTGGCGCGGGGAACTCTCAACAATATCAATTACATCCGACATGGAGCCCTGTTTATCCCCGCTGGCGCGGGGAACTCAGCgtgt < 8:43495/149‑1 (MQ=255) gcgcGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGc > 3:110383/1‑148 (MQ=255) gcgACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGc < 3:102831/147‑1 (MQ=255) cgACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTc < 1:31444/149‑1 (MQ=255) tCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCgccagcggggataaaccgttt > 1:58377‑M1/1‑39 (MQ=255) tCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCgccagcggggataaaccgttt < 2:58377‑M1/60‑22 (MQ=255) aGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGt < 7:57164/149‑1 (MQ=255) aGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGt > 5:36383/1‑149 (MQ=255) cAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGc < 6:22086/138‑1 (MQ=255) cAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGc > 5:22086/1‑138 (MQ=255) cGATCCAAACGGTTTATCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgccagcggggataaaccg < 5:108741‑M2/103‑77 (MQ=255) cGATCCAAACGGTTTATCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgccagcggggataaaccg > 6:108741‑M2/1‑27 (MQ=255) gATCCAAACGGTTTATCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgag < 1:11741‑M2/138‑113 (MQ=255) gATCCAAACGGTTTATCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgag > 2:11741‑M2/1‑26 (MQ=255) aaaCGGTTTATCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctga < 2:58377‑M2/60‑40 (MQ=255) aaaCGGTTTATCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctga > 1:58377‑M2/1‑21 (MQ=255) aaCGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAgg < 3:116591/58‑1 (MQ=255) aCGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGaa < 4:110383/149‑1 (MQ=255) gTTTATCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgcccgcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcga < 5:122853‑M2/127‑112 (MQ=255) gTTTATCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcga > 6:122853‑M2/1‑16 (MQ=255) tCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgagttccccgcgccagcggggataaacc < 4:128155‑M2/148‑138 (MQ=255) tCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgagttccccgcgccagcggggataaacc > 3:128155‑M2/1‑11 (MQ=255) cccGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGt > 8:13513/1‑147 (MQ=255) ccGCgccagcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgagttccccgcgccagcggggataaaccgt > 3:88690‑M1/1‑4 (MQ=255) | ATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGTG > NC_000913/2878118‑2878408 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |