New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 287826522 (0.680)10 (0.330) 10/240 2.0 31.9% intergenic (+647/+304) iap/ygbF aminopeptidase in alkaline phosphatase isozyme conversion/CRISPR adaptation ssRNA endonuclease
?NC_000913 = 2878269 22 (0.720)intergenic (+651/+300) iap/ygbF aminopeptidase in alkaline phosphatase isozyme conversion/CRISPR adaptation ssRNA endonuclease

ACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGT  >  NC_000913/2878127‑2878407
                                                                                                                                              |                                                                                                                                          
aCGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCgcgg                                                                                                                                        >  3:88690‑M2/1‑143 (MQ=255)
   gTTTATCCCCGCTGGCGCGGGGAACCCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAAc                                                                                                                                   >  3:118364/1‑149 (MQ=255)
    tttATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAAct                                                                                                                                  >  7:43495/1‑149 (MQ=255)
    tttATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAAct                                                                                                                                  >  5:141144/1‑149 (MQ=255)
    tttATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAAct                                                                                                                                  >  3:58567/1‑149 (MQ=255)
                    cgGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAAtt                                                                                                                  <  4:58567/149‑1 (MQ=255)
                         aaCTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAAc                                                                                                             <  6:141144/149‑1 (MQ=255)
                                            gcAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGttt                                                                                           >  4:102831/1‑148 (MQ=255)
                                            gcAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTa                                                                                          >  2:31444/1‑149 (MQ=255)
                                                       gcgATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGcgc                                                                                 >  5:67914/1‑145 (MQ=255)
                                                        cgATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGgcg                                                                              >  8:57164/1‑149 (MQ=255)
                                                               cgGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGaa                                                                       <  4:118364/149‑1 (MQ=255)
                                                                         ccGCTGGCGCTGGGAACTCGCGACCGCTCAGAACATCCTGATCCGATCCAAACGGTTTACCCCCGCTGGCGCGGGGAACTCTCAACAATATCAATTACATCCGACATGGAGCCCTGTTTATCCCCGCTGGCGCGGGGAACTCAGCgtgt                                                             <  8:43495/149‑1 (MQ=255)
                                                                               gcgcGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGc                                                        >  3:110383/1‑148 (MQ=255)
                                                                                            gcgACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGc                                            <  3:102831/147‑1 (MQ=255)
                                                                                             cgACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTc                                         <  1:31444/149‑1 (MQ=255)
                                                                                                      aGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGt                                <  7:57164/149‑1 (MQ=255)
                                                                                                      aGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGt                                >  5:36383/1‑149 (MQ=255)
                                                                                                              cAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGc                                   <  6:22086/138‑1 (MQ=255)
                                                                                                              cAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGc                                   >  5:22086/1‑138 (MQ=255)
                                                                                                                    cGATCCAAACGGTTTATCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgccagcggggataaaccg                                                                <  5:108741‑M2/103‑77 (MQ=255)
                                                                                                                    cGATCCAAACGGTTTATCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgccagcggggataaaccg                                                                >  6:108741‑M2/1‑27 (MQ=255)
                                                                                                                     gATCCAAACGGTTTATCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgag                            <  1:11741‑M2/138‑113 (MQ=255)
                                                                                                                     gATCCAAACGGTTTATCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgag                            >  2:11741‑M2/1‑26 (MQ=255)
                                                                                                                          aaaCGGTTTATCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctga                                                                                                     <  2:58377‑M2/60‑40 (MQ=255)
                                                                                                                          aaaCGGTTTATCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctga                                                                                                     >  1:58377‑M2/1‑21 (MQ=255)
                                                                                                                           aaCGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAgg                                                                                                      <  3:116591/58‑1 (MQ=255)
                                                                                                                            aCGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGaa          <  4:110383/149‑1 (MQ=255)
                                                                                                                               gTTTATCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgcccgcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcga                             <  5:122853‑M2/127‑112 (MQ=255)
                                                                                                                               gTTTATCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcga                             >  6:122853‑M2/1‑16 (MQ=255)
                                                                                                                                    tCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgagttccccgcgccagcggggataaacc   >  3:128155‑M2/1‑11 (MQ=255)
                                                                                                                                    tCCCCGCTGGCgcggggataaaccgtttggatcgggtctggaatttctgagcggtcgcgagttccccgcgccagcggggataaaccgcgaatcgcgcataccctgcgcgtcgccgcctgcgagttccccgcgccagcggggataaacc   <  4:128155‑M2/148‑138 (MQ=255)
                                                                                                                                      cccGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGt  >  8:13513/1‑147 (MQ=255)
                                                                                                                                              |                                                                                                                                          
ACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTCAACATTATCAATTACAACCGACAGGGAGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCGTGTTCGGCATCACCTTTGGCTTCGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGCGT  >  NC_000913/2878127‑2878407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.