Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 458,790 IS186 (–) +6 bp :: Δ1 bp 52.4% intergenic (+90/‑93) clpX → / → lon ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 458790 =26 (0.480)25 (0.440) 21/412 NT 48.3% intergenic (+90/‑98) clpX/lon ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La
?NC_000913 608008 = NA (NA)noncoding (2/1345 nt) IS186 repeat region
* ? NC_000913 = 45879524 (0.440)30 (0.540) 23/410 NT 54.8% intergenic (+95/‑93) clpX/lon ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La
?NC_000913 = 609351 NA (NA)noncoding (1345/1345 nt) IS186 repeat region

ACAATTTGGATGGTAGTCCCTTCTTCGCATGGAGGCAATATAAACATGCTGACGAAATATGCCCTTGCGGCAGTCATAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCAT  >  NC_000913/607791‑608233
                                                                                                                                                                                                                         |                                                                                                                                                                                                                                  
aCAATTTGGATGGTAGTCCCTTCTTCGCATGGAGGCAATATAAACATGCTGACGAAATATGCCCTTGCGGCAGTCATAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCt                                                                                                                                                                                                                         <  1:429266/229‑1 (MQ=255)
          tGGTAGTCCCTTCTTCGCATGGAGGCAATATAAACATGCTGACGAAATATGCCCTTGCGGCAGTCATAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAggg                                                                                                                                                                                                               <  1:493128/229‑1 (MQ=255)
             tttttctttctgcGTATGGAGTCAATATAAACATGTTGACGAAATATGCCCTTGCGGCATCCATAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTtg                                                                                                                                                                                                            <  2:692698/222‑1 (MQ=255)
             tAGTCCCTTCTTCGCATGGAGGCAATATAAACATGCTGACGAAATATGCCCTTGCGGCAGTCATAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTtg                                                                                                                                                                                                            <  1:385347/229‑1 (MQ=255)
                                                cTGACGAAATATGCCCTTGCGGCAGTCATAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGCAGAAGCCGTTGTGCGGGGGGTAATCCCATAATCGCTAACTTAAGGGTTGTGGGATTACGCCTGATTTAGTTTAACAGGCCGAt                                                                                                                                                                          >  2:707139/1‑228 (MQ=255)
                                                cTGACGAAATATGCCCTTGCGGCAGTCATAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGGCTTACCGCTGATATGATTTAACGTGCCGATg                                                                                                                                                                         >  1:514753/1‑229 (MQ=255)
                                                   aCGAAATATGCCCTTGCGGCAGTCATAGTGCTGTGTTTAACGGTGCTGGGCTTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAGAAAGTAACCGTTGTGCGGGGAGTAATCCCATAAACCCTAACTTAAAGGGTGTGGTATTACGCCTGATATGAGTTAAAGAGCCGTTAAAta                                                                                                                                                                     >  2:41846/1‑228 (MQ=255)
                                                         tatGCCCTTGCGGCAGTCATAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTActct                                                                                                                                                                >  2:600341/1‑229 (MQ=255)
                                                             cccTTGCGGCAGTCATAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTTAAGGAACGTAATATTGAGCTTAAGGCAGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGAGCGGGGAGTAATCCCATAAGCGCCAACTTAACGGTTGTGGAATTACGCCTGATATGATTTAACGTGCCGATAAATTAACCTCagg                                                                                                                                                            >  2:372207/1‑227 (MQ=38)
                                                                 tGCGGCAGTCATAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGGTGAATCCCCTAAGCGCTAACTTAAGGGTTGTGGGATTACGCCTGATATGATTTAACGTGCCGAGGAATTACTCTCACGATaa                                                                                                                                                        >  1:750635/1‑229 (MQ=255)
                                                                 tGCGGCAGTCATAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGAGCTAACTTACGGGTTGTGGTATTATGCCTGATCAGATTTAACGTGCCGATGAATTACTTTCACGCTaa                                                                                                                                                        >  1:72390/1‑229 (MQ=255)
                                                                     gCAGTCATAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTTCAACGGTAACTgg                                                                                                                                                    >  1:25187/1‑229 (MQ=255)
                                                                               tGCTGTGTTGAACGGTGCTGGGATTTACGCGTATGGTCGGAGACGCGCTGTGTGAGTTTACGGTGAAGGAACGTAATAATGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAAtt                                                                                                                                           <  1:288975/228‑1 (MQ=255)
                                                                                  tttttttAACGGGGTGGGGATTTACGCTTCTGGTTGGGGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTg                                                                                                                                        <  2:209922/224‑1 (MQ=255)
                                                                                   gtgtTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGGTGAATCCCCTAAGCGCTAACTTAAGGGTTGTGGTATTACGCCGGCTATGATTTAACGGGCCGATGAATAATTTTCACGTAAAATGGTAGGCAATTCTGGc                                                                                                                                      >  2:602515/1‑229 (MQ=37)
                                                                                    tgtTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCCTAAGCGCTAACTTAAGGGGTGTGGTATTACGCCTGGTATGATTTAACGTGCCGATGAATTACTCTCCCGATAACTGGTCACAAATTCTgggc                                                                                                                                     >  2:129084/1‑227 (MQ=255)
                                                                                    tctttaagtgggCTGGGATTTACGTTTCTGGTCGGAGACTCGTTGTGTGAGTTTACGGTGAAGGAACGTAATGTTGAGTTGAAGGCTGTGCCCGCTTACGAACCGAAGAAGTAGGCGTTGTGCGGGGAGTAATCCCATAAGCGATAACTTAAGGGTTGTGGTATGACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGc                                                                                                                                      <  1:343843/217‑1 (MQ=25)
                                                                                         aaCGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGGGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCCTAAGGGCTAACTTAAGGGTTGGGGGATTAGGCCTGAAATACTTTAACGTGCCGATGATTTACTTTCCGGTAAACTGTCTAGCAATTTAGCCCCatat                                                                                                                               >  2:96622/1‑229 (MQ=255)
                                                                                         aaCGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCatat                                                                                                                               >  1:639703/1‑229 (MQ=255)
                                                                                              tGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGAGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGAAGCCGTTGTGCGGGCAGTAAGCCCATAAGCGCTAACTTAAGGATTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTTGCCCGTATTGGTa                                                                                                                          >  1:538334/1‑229 (MQ=255)
                                                                                                cTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGCGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGTATTTAGGCCGGATATGCTTAAAGTGGCGGTTGAATTACTTCCACGTTAACTGGTAAGCATTTTGGCGCCAAATTGGTaac                                                                                                                        >  1:38312/1‑228 (MQ=255)
                                                                                                cTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTAGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGCTGTGGTATTACGCCTGATCTGATTTAACGTGCCGTTGAATTACTCTCACGTCACCTGGTCCGAAATTTCGGCCCacttaggaaac                                                                                                                        >  2:145193/1‑219 (MQ=255)
                                                                                                      tttACGCTTCTGGTTGGAGACTCGCTGTGTGAGTTTACGGGGAAGGAACGTAATATTGAGGTTAAGGCTGTTATCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCgaa                                                                                                                  <  1:129084/229‑1 (MQ=255)
                                                                                                        tACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGCTTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCGgacga                                                                                                                >  1:165214/1‑229 (MQ=255)
                                                                                                        tACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGGTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAATCGCTAACTTCAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCCATGAATTACTTTCACGAAAAATGGTCCGCAATTTTGGCCCATATTGGTAAACCCgaa                                                                                                                  >  2:536755/1‑227 (MQ=37)
                                                                                                            ttgttGGTCGGTGTGTCGGTGTGTGAGTTTCAGGTGAAGAGACGTAAGATTGAGTTTAAGGCGTTTCTCGCTTACGAACCTAAGAAGTAGCCTTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTGGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACt                                                                                                             <  2:98379/224‑1 (MQ=18)
                                                                                                              tCTGGTCGGAGGCTCGCTGTGTGAGTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGa                                                                                                          <  1:41846/228‑1 (MQ=255)
                                                                                                                       agaCTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGc                                                                                                 >  1:476157/1‑229 (MQ=255)
                                                                                                                           tCGCTGGGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGt                                                                                             <  1:600342/229‑1 (MQ=255)
                                                                                                                                   tgAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGCTACTTCGGCACGTAATTCCg                                                                                      >  1:561942/1‑228 (MQ=255)
                                                                                                                                   tgAGTTTACGGGGAAGGAACGTAATAGTGAGTTTAAGGCTGTTCTCGCTGACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCg                                                                                      <  1:602516/228‑1 (MQ=255)
                                                                                                                                         tACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTAAGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGAAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGctg                                                                                >  2:483698/1‑227 (MQ=255)
                                                                                                                                                      cGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTATGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCCCTAACCcgcggccgc                                                                  >  1:558621/1‑229 (MQ=255)
                                                                                                                                                                aGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCata                                                                                                                                >  1:535529/1‑157 (MQ=255)
                                                                                                                                                                aGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCata                                                                                                                                <  2:535529/157‑1 (MQ=255)
                                                                                                                                                                  tttAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGAt                                                                                                                                                                          >  1:248864/1‑114 (MQ=255)
                                                                                                                                                                  tttAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGAt                                                                                                                                                                          <  2:248864/114‑1 (MQ=255)
                                                                                                                                                                  tttAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTg                                                        >  1:721357/1‑227 (MQ=255)
                                                                                                                                                                      aggtttgtctcGCTTACGACCCGAATAAGGTGCTGTTGTGCGGGGAGTAATCCCTTAAGGGCTAACTTAAGGGTTGGTGTATTACGCCTGATATGATTTAACGTGCCGAGGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGAtgctg                                                  <  2:750634/222‑1 (MQ=14)
                                                                                                                                                                      aGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGAtgctg                                                  <  1:96622/229‑1 (MQ=255)
                                                                                                                                                                            ttCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGGTAACTGGTCAGCAATTCTGGCCCCTATTGGTAAGACCGAAGAACTGCATACTTCTGCCCGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATCCGGGGTGCTGAAActc                                            >  2:525174/1‑229 (MQ=17)
                                                                                                                                                                            ttCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATAATTCGGCACGTAAACCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGAGGCGGCAAatc                                            >  2:273644/1‑229 (MQ=255)
                                                                                                                                                                              ctcGCTTAGCAACCGAAGAAGTCACTGTTGTGCGGGGAGTAACACCATAAGGCCTACGTTAAGGTTTTTGGTTTTACGCCTGATATGAATTAACGTTCCGATGAATTACTCTCACGATAACTGGTCAGAAATACTGGCCCTTATTGGTAAGCCCGAAGAACTGGATGCGACGGCACGTAATGCCGGGGCTCTACCCGGCCGCCGCGAAATTCGTGATGCTGCAACTCTg                                          <  2:538334/229‑1 (MQ=14)
                                                                                                                                                                                cGCTTACGAACCGAAGAAGTAGCCTTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGGGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCt                                        <  1:707140/229‑1 (MQ=255)
                                                                                                                                                                                  cTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGGCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGAACGAAATGCCGGGGCTCTAACCCGCCCCCGCGAAATTCGGGATGCTGAAACCCTGCTat                                      >  2:661157/1‑228 (MQ=255)
                                                                                                                                                                                                        gTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTTGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGACCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGcc                 <  1:261907/228‑1 (MQ=37)
                                                                                                                                                                                                               ggggAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATGCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCgggggg         <  1:273644/229‑1 (MQ=21)
                                                                                                                                                                                                                   aGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGATTACTTCGGCACGTAATGCCGGGGTCCTAACCCGCCGCCCGGAAATTCGGGATGCTGCAACCCTGCTGCGTCTGGGCTTGGCTTCCGGCCCCgggggggggc     >  2:487933/1‑225 (MQ=11)
                                                                                                                                                                                                                      aaTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAAc                                              >  1:286623/1‑185 (MQ=31)
                                                                                                                                                                                                                      aaTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAAc                                              <  2:286623/185‑1 (MQ=31)
                                                                                                                                                                                                                      aaTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGAACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGTTGCAACTCTGCTACGCCTGGGGCTGGCTTACGGCCCCGGGGGGATGtact  >  2:52513/1‑226 (MQ=2)
                                                                                                                                                                                                                         |                                                                                                                                                                                                                                  
ACAATTTGGATGGTAGTCCCTTCTTCGCATGGAGGCAATATAAACATGCTGACGAAATATGCCCTTGCGGCAGTCATAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCAT  >  NC_000913/607791‑608233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.