mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 23 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4522458 = | 200 (1.200) | 3 (0.020) | 3/490 | NT | 1.6% | coding (1637/1968 nt) | yjhG | putative dehydratase |
| ? | NC_000913 | 4522501 = | 175 (1.090) | coding (1594/1968 nt) | yjhG | putative dehydratase | |||||
| * | ? | NC_000913 | = 4433499 | 187 (1.120) | 3 (0.020) | 3/506 | NT | 1.6% | coding (526/861 nt) | qorB | NAD(P)H:quinone oxidoreductase |
| ? | NC_000913 | 4433503 = | 184 (1.110) | coding (522/861 nt) | qorB | NAD(P)H:quinone oxidoreductase | |||||
| * | ? | NC_000913 | 4277028 = | 168 (1.010) | 3 (0.020) | 3/494 | NT | 1.9% | coding (1558/1587 nt) | yjcC | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase |
| ? | NC_000913 | 4277052 = | 155 (0.960) | coding (1582/1587 nt) | yjcC | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase | |||||
| * | ? | NC_000913 | = 3587223 | 149 (0.890) | 3 (0.020) | 3/492 | NT | 2.0% | coding (281/441 nt) | yhhA | DUF2756 family protein |
| ? | NC_000913 | = 3587297 | 155 (0.960) | coding (355/441 nt) | yhhA | DUF2756 family protein | |||||
| * | ? | NC_000913 | = 3220246 | 158 (0.950) | 5 (0.030) | 5/490 | NT | 3.2% | coding (753/1380 nt) | patA | putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent |
| ? | NC_000913 | = 3220398 | 146 (0.910) | coding (905/1380 nt) | patA | putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent | |||||
| * | ? | NC_000913 | 2868282 = | 180 (1.080) | 3 (0.020) | 3/496 | NT | 1.8% | coding (472/1140 nt) | nlpD | activator of AmiC murein hydrolase activity, lipoprotein |
| ? | NC_000913 | 2868317 = | 158 (0.970) | coding (437/1140 nt) | nlpD | activator of AmiC murein hydrolase activity, lipoprotein | |||||
| * | ? | NC_000913 | 2796365 = | 133 (0.800) | 4 (0.020) | 4/490 | NT | 3.0% | coding (422/450 nt) | ygaU | uncharacterized protein |
| ? | NC_000913 | 2796386 = | 134 (0.830) | coding (401/450 nt) | ygaU | uncharacterized protein | |||||
| * | ? | NC_000913 | = 2713829 | 169 (1.010) | 6 (0.040) | 6/488 | NT | 3.9% | coding (934/1335 nt) | srmB | ATP‑dependent RNA helicase |
| ? | NC_000913 | = 2713908 | 138 (0.860) | coding (1013/1335 nt) | srmB | ATP‑dependent RNA helicase | |||||
| * | ? | NC_000913 | 2594847 = | 151 (0.900) | 3 (0.020) | 3/504 | NT | 2.0% | coding (1013/2016 nt) | tmcA | elongator methionine tRNA (ac4C34) acetyltransferase |
| ? | NC_000913 | 2595021 = | 147 (0.890) | coding (839/2016 nt) | tmcA | elongator methionine tRNA (ac4C34) acetyltransferase | |||||
| * | ? | NC_000913 | = 2553462 | 147 (0.880) | 3 (0.020) | 3/496 | NT | 2.0% | coding (238/900 nt) | hemF | coproporphyrinogen III oxidase |
| ? | NC_000913 | = 2553468 | 149 (0.920) | coding (244/900 nt) | hemF | coproporphyrinogen III oxidase | |||||