Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 4,001,645 Δ5 bp 100% coding (220‑224/951 nt) corA → magnesium/nickel/cobalt transporter

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4001645 4001649 5 83 [0] [0] 83 corA magnesium/nickel/cobalt transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40016440 (0.000)77 (1.540) 57/414 NT 100% coding (219/951 nt) corA magnesium/nickel/cobalt transporter
?NC_000913 4001650 = 0 (0.000)coding (225/951 nt) corA magnesium/nickel/cobalt transporter

TCCCGGTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAA  >  NC_000913/4001418‑4001867
                                                                                                                                                                                                                                   |                                                                                                                                                                                                                               
tCCCGGTCATGCTGAGCCCATTGCAACGGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGACCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATc                                                                                                                                                                                                                                <  1:494867‑M1/228‑2 (MQ=255)
tCCCGGTAATGGTGAGCGCATTTCACCTGGAAAATAACCGACTGGCCCGGCGGGAAGTCGAAGAGTCACAACCCCTGGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATc                                                                                                                                                                                                                                <  1:624859‑M1/228‑2 (MQ=255)
   cGGTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTTGACCGGCTTGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATct                                                                                                                                                                                                                               <  1:493022‑M1/226‑3 (MQ=255)
         tGCTGACTGCATTTCAGATGGAAAATTACCGGCTGACCGGGGTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttctt                                                                                                                                                                                                                        <  1:291773‑M1/227‑10 (MQ=255)
          gCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATAGGCACGGTTCTTTGAAGACGAGGACGGCCTGCATatccttctttt                                                                                                                                                                                                                      >  1:617358‑M1/1‑217 (MQ=255)
                   aTTTCAACTGGAAAATAACCGTCTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaag                                                                                                                                                                                                             <  1:592810‑M1/228‑21 (MQ=255)
                     ttCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGCCGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGACTCGGCACGTTTCTTTGAAGACGACGACGGCCTCCATctccttcttcttctttgaaga                                                                                                                                                                                                            >  1:278537‑M1/1‑206 (MQ=255)
                        aatgggaacaTAACCGATTGACCCGGCGGGAAATCGAAGGGTCACAACCCCTTGGAAATGCCGGATGGATTGATCTTGTCGAACCGGACGGCGACGGGCGGCTGCGCGTACAATCTGAACTTGGCCAGAGCCTTGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcg                                                                                                                                                                                                        <  2:432940‑M1/224‑26 (MQ=255)
                        aaCTGGAAAATACCCGGCTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAAGGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcg                                                                                                                                                                                                        <  1:605571‑M1/228‑26 (MQ=255)
                               aaaaacccgggtgacccgggcggAATTCGAAGGTGCACTACCCCTTGTAAATGCGTTATGGATTGCTCTTGTCGAACCGGAACACGACGGCGGCCTGCGCGTACAATCTGAACTTGGCCAGAGCCTTGCACCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatc                                                                                                                                                                                                 <  2:359348‑M1/217‑33 (MQ=255)
                                  taacccgtcgccccggggggacgtcGAAGAGTCACAACCCCTTGGAAATGCAGTATGGATTGATCTTGCCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacg                                                                                                                                                                                              <  2:618233‑M1/217‑36 (MQ=255)
                                       gACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCTCGGCAACCCGCCCGGAACTGGAAGACATCGAAGGATCGGCACGTTTCTTTGAAGCCGACGAAGGCCGGCACctccttcttcttctttgaagatgcggaaggtacagccggt                                                                                                                                                                                         >  1:324897‑M1/1‑188 (MQ=255)
                                       gACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGACGACATCGAAGCATCGGCACGTTTCTTTGAAGCCAACGACGGCCGGCCTctccttcttcttctttgaagttgcggaagagcaccccgga                                                                                                                                                                                         >  2:213421‑M1/1‑188 (MQ=255)
                                       gACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggt                                                                                                                                                                                         <  1:421558‑M1/228‑41 (MQ=255)
                                        aCTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGACCGTTTCTTTGAAGACGACGACGGCCTGCATctccttctccttctttggatgtgcggaaggtcaatccggga                                                                                                                                                                                        >  1:600007‑M1/1‑187 (MQ=255)
                                            aCCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCCCGTTTTTTTGACGACGACGACGCCCTGCATctccttctctttctttgaagatgcggaaaatacccccggtaactc                                                                                                                                                                                    >  2:447265‑M1/1‑183 (MQ=255)
                                                ggCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGGGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccact                                                                                                                                                                                <  1:88909‑M1/228‑50 (MQ=255)
                                                 gCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttctttttctttgaagatgcggaagatcacgccggtaaacccaccg                                                                                                                                                                               >  2:542253‑M1/1‑178 (MQ=255)
                                                          cGAAGAGTCCACACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcattta                                                                                                                                                                      <  1:338309‑M1/228‑60 (MQ=255)
                                                             agggtccaaaccccttgtAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGCCGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttacc                                                                                                                                                                    <  1:431310‑M1/219‑62 (MQ=255)
                                                              ggttacccaccccttggAGATTGATTAGGGATTGATCTGGTCGAACCGGGCGACGGCGAGCACCTGCGGGTACAATCTGAAATTGGCCAGGACCTGGCAACCCGCCCGGAACTGGAAGACATCGAATCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaggatcacgccggtaactccactgtggcatttacca                                                                                                                                                                   <  2:257321‑M1/219‑63 (MQ=255)
                                                                   acaACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatc                                                                                                                                                                 >  1:400398‑M1/1‑160 (MQ=255)
                                                                      aCCCCTTGGATATTGAGTATGGATTGATCTTGGTGAACCGGACGACGACGGGCGCCTGCGTGTACAATCGGAAGTTGGCCAGAGCCGGGCAACCCGCCCGGAACTGGAAGACAACGAAGCATCGGCAAGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatg                                                                                                                                                          <  2:278537‑M1/228‑72 (MQ=255)
                                                                       ccccTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatg                                                                                                                                                          <  1:542253‑M1/227‑72 (MQ=255)
                                                                           ttGTAAATGCAGTCTGGATTGACCTTGGCGAACCGGACGACGACGAGCGCCTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcg                                                                                                                                                      <  1:343665‑M1/227‑76 (MQ=255)
                                                                             gTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtc                                                                                                                                                    <  1:204809‑M1/227‑78 (MQ=255)
                                                                                    caggagggattgacCTTGCCGAACCGGACGACGACGAGGGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttact                                                                                                                                            <  1:436636‑M1/222‑86 (MQ=255)
                                                                                       tATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagataacgccggtaactcccctgtggcatttaccatccgggatgttcgtctgtttactct                                                                                                                                          >  1:518067‑M1/1‑140 (MQ=255)
                                                                                          ggATTGATCTTGGCGACCCGGACGACGACGAGCGACTGCGCGTACAATCGGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcg                                                                                                                                       <  1:328915‑M1/227‑91 (MQ=255)
                                                                                                 tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCCTctccttcttcttctttgaagatgcggaaaatcacgccggtaactccactgtggcatttaccatccgggatggccgctggtttcctctccctgaggg                                                                                                                                 >  2:52743‑M1/1‑130 (MQ=255)
                                                                                                 tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaggatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctccgtgacgctg                                                                                                                               >  1:654960‑M1/1‑130 (MQ=255)
                                                                                                 tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagctcacgccggtaactccactgtggcctttcccatccgtgatggtcgtctgttttctctgcgtgagaggg                                                                                                                               >  2:366493‑M1/1‑130 (MQ=255)
                                                                                                 tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtg                                                                                                                               >  1:129653‑M1/1‑130 (MQ=255)
                                                                                                 tCTTGTCGAACAGGACGACGACGAGCGACTGCGCGTAAAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGTAACTGGAAGACATCGCAGCATCGGCACGTTTCTTTGAAGACGAGGACGGCCTGCATctccttcttcttctttgaagaagcgggagatcacgccggtaactcccctgtggcatttaccatacgtgctgggcgtctgtttacgctgcgtgagcgtg                                                                                                                               >  2:76342‑M1/1‑130 (MQ=255)
                                                                                                     gTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagttgcggaagttcccgccggtaactcccctgtggcatttaccctccctgctggccgcctgtttctcctccgtgggggtgaacc                                                                                                                           >  2:587687‑M1/1‑126 (MQ=255)
                                                                                                     gTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcg                                                                                                                                       <  1:202158‑M1/216‑91 (MQ=255)
                                                                                                     gTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcg                                                                                                                                       >  2:202158‑M1/1‑126 (MQ=255)
                                                                                                     gTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccgggaactccactgaggcatttaccatccgtgatggtggtctgtttactctcgctgagcgggaact                                                                                                                           >  1:428643‑M1/1‑126 (MQ=255)
                                                                                                       ccaaccGGACGACGACGAGCCACTGCGCTTACAATCTGAACTTGGCCAGGGCCTGGCACCCCGCCCGGACCTGGAAGACATCGAAGCATCGGCCCGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactg                                                                                                                          <  1:402961‑M1/225‑104 (MQ=255)
                                                                                                        gAACCGGACCGCGACGGGCGGCTGCGTGTACAATCGGAACTTGCGCAGAGCCTGGCACCCCGCCCGAGACTGGAAGACATCGAATCATCGGCAAGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcc                                                                                                                        <  2:427723‑M1/228‑106 (MQ=255)
                                                                                                          aCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttcctctgcgtgagcgtgaactg                                                                                                                          >  1:159329‑M1/1‑121 (MQ=255)
                                                                                                           ccGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactttggcatttaccatccgggctggtcgtctgtttattctccgtgagcgggaactgccccc                                                                                                                     >  2:151770‑M1/1‑120 (MQ=255)
                                                                                                             ggACAACGACGAGCGACGGGGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctttttactctgcgtgagcgtgaactgcccgctt                                                                                                                   <  1:587687‑M1/228‑111 (MQ=255)
                                                                                                              gacgacgacGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccggtagtgtcgtctgtttactctgcgtgcgcgtgaactggccgcttt                                                                                                                  >  2:467428‑M1/1‑117 (MQ=255)
                                                                                                               acgacgacgAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcggcgttttactctgcgtggccgggaactgccccctttt                                                                                                                 >  2:620545‑M1/1‑116 (MQ=255)
                                                                                                                   cgccggccgcttgcgcgtaacatCTGAATTTGGCCACGGCCTGGCAACCCGCCCGGACCTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGCCGACGACGGCCTGCTTctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtc                                                                                                             <  2:324897‑M1/217‑117 (MQ=255)
                                                                                                                                          cTGAACTTGGCCGGGCCCTTGCCCCCCGCCCGGAACTGGAAGACAACGAAGCACCGGCACTTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttgtaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagc                                                                                      <  2:518067‑M1/228‑140 (MQ=255)
                                                                                                                                          cTGAACTTGGCCAGGGCCTGGCCACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagc                                                                                      <  1:54699‑M1/228‑140 (MQ=255)
                                                                                                                                          cTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGAAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagc                                                                                      <  1:568115‑M1/228‑140 (MQ=255)
                                                                                                                                             aaCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCGCGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggcagatcacgccggcaactccactgtggcctttcccatccgtgatggtcgtctgtttaccctgcgtgagcgtgacctgcccgcttttcttctttctggtatgggtgcccggagccag                                                                                   >  2:444663‑M1/1‑86 (MQ=255)
                                                                                                                                              aggtggcCGGACCCTGGGAGCCCGGCCGGAACGGGAAGAACTCCAACCTTCGGCACCTTTCTTTGAAGGCGACGCCGGCCCGCATctccttttttgtctttgaagatggggaagatcacgccggtaactcctctgtggcatttaccatccgtgatggtcgtttgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagt                                                                                  <  2:428643‑M1/225‑144 (MQ=255)
                                                                                                                                              aCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttcccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtaccgtatgcgtgcccgtagccaat                                                                                  >  2:566747‑M1/1‑85 (MQ=255)
                                                                                                                                                   gCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccctccgtgatggtcgtctgtttactctgcgggagcgtgaacggcccgcttttcgtcggtatcgtatgcgtgcccgtagcccttcgat                                                                              >  2:152353‑M1/1‑80 (MQ=255)
                                                                                                                                                   gCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttcctctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagtcgat                                                                              >  1:476468‑M1/1‑80 (MQ=255)
                                                                                                                                                   gCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcggctgtatcgtatgcgtgcccgtagccagtcgag                                                                              >  1:166761‑M1/1‑80 (MQ=255)
                                                                                                                                                   gCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgcctgtattgaatccgtgcccgtgaccagtcgat                                                                              >  1:576818‑M1/1‑80 (MQ=255)
                                                                                                                                                   gCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgcctgtatcgtatgcgtgcccgtagccagtcgat                                                                              >  1:281732‑M1/1‑80 (MQ=255)
                                                                                                                                                   gCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactcc                                                                                                                                                                                   >  2:211764‑M1/1‑80 (MQ=255)
                                                                                                                                                    ccAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactcca                                                                                                                                                                                  <  1:211764‑M1/126‑48 (MQ=255)
                                                                                                                                                        agCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttattctgcgtgagcgggaactgcccgcttttcggctgtatcgtatgcgtgcccgtgcccagacactgggcac                                                                        >  2:532898‑M1/1‑75 (MQ=255)
                                                                                                                                                             ggCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcatgcccgtagccagtcgatggtagacggta                                                                   >  1:301990‑M1/1‑70 (MQ=255)
                                                                                                                                                             ggCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggta                                                                                                                                                                                        >  1:526882‑M1/1‑70 (MQ=255)
                                                                                                                                                             ggCAACCCGCCCGGAACTGGAAGACACCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagtcgatggtagacggta                                                                   <  1:467428‑M1/228‑159 (MQ=255)
                                                                                                                                                              gccccccccccggaacTGGAAAGACTTGAAGCCTCGCCCGGTTTCTTTGAAGACGGCGCCGGCCGGCATctcctttgtcttctttgaagatgcggaagatcacgccggtaactccactggggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagtcgatggtagacggtaa                                                                  <  2:600007‑M1/224‑160 (MQ=255)
                                                                                                                                                              gCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaa                                                                                                                                                                                       <  2:526882‑M1/111‑43 (MQ=255)
                                                                                                                                                                  cccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagtcgatggtagacggtaacgc                                                               >  1:34216‑M1/1‑65 (MQ=255)
                                                                                                                                                                         gggactgGAAGACATCGAAGCATCGGCACGTTTTTTTGAAGGCGTCGCCGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactcccctgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagtcgatggtagacggtaacgcctacgagt                                                       <  2:617358‑M1/225‑171 (MQ=255)
                                                                                                                                                                           aaCTGGAAGCCATCCAAGCATCGGCTGGTTTCTTTGAAGACGCCGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagtcgatggtagacggtaacgcctacgagtt                                                      <  1:45627‑M1/227‑172 (MQ=255)
                                                                                                                                                                           aaCTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcccgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagtcgatggtagacggtaacgcctacgagtt                                                      <  1:447265‑M1/227‑172 (MQ=255)
                                                                                                                                                                            aCTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcggatgcggtcccgtagccaggcgagggtagagggtaacccctacgagttgt                                                    >  2:457076‑M1/1‑55 (MQ=255)
                                                                                                                                                                                ggaagcctccgaagcatcgGCACGTTTCTTTGAAGGCGACGACGGCCTGCATctcctgcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagtcgatggtagacggtaacgcctacgagttgctgc                                                 <  2:181964‑M1/219‑177 (MQ=255)
                                                                                                                                                                                       aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccaccgtggcctttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcttatgcgtgcccgtagccagtcgcgggtagccggtaacgcctacgcgttgctgctgggtct                                          >  2:342435‑M1/1‑45 (MQ=255)
                                                                                                                                                                                                  ggcgcttttctttgaAGACGACGACGGCCTGAATctccctcttcttcttggaagatgcggaagagcacgcgggtaaccccacgggggcatttaccatccgtgatggtcgtctgttttctctgcgtgagcgtgaactgcccgcttgtcgtctgtatcgtatgcgtgcccgtagccagtcgatggtagacggtaacgcctacgagttgctgctggatctgttcgaaacca                               <  2:476468‑M1/222‑195 (MQ=255)
                                                                                                                                                                                                         ttCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagtcgatggtatacggtaacgcctcacagttgctgctggatctgttcgaaaccaaaaagga                        >  2:64813‑M1/1‑27 (MQ=255)
                                                                                                                                                                                                            tttGAAAGCGACGCCGGCCTGCATctccttttgcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagtcgatggtagacggtaacgcctacgagttgctgctggatctgttcgaaaccaaaatcgaaca                     <  1:213421‑M1/228‑205 (MQ=255)
                                                                                                                                                                                                                  gacgacgacGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagtcgatggtagacggtaacgcctacgagttgctgctggatctgttcgaaaccaaaatcgaacagttggc               <  1:151770‑M1/228‑211 (MQ=255)
                                                                                                                                                                                                                          cgGCCTGCATtcccttcttcttctttgaaggtgcggaagatcgcgccggtaactccacggtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagtcgatggtagacggtaacgcctacgagttgctgctggatctgttcgaaaccaaaatcgaacagttggcagatgaaa       <  2:576818‑M1/228‑219 (MQ=255)
                                                                                                                                                                                                                            gCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagtcgatggtagacggtaacgcctacgagttgctgctggatctgttcgaaaccaaaatcgaacagttggcagatgaaat      <  1:620545‑M1/227‑220 (MQ=255)
                                                                                                                                                                                                                             ccTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtc                                                                                                                                                       >  2:596379‑M1/1‑7 (MQ=255)
                                                                                                                                                                                                                              cTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcg                                                                                                                                                      <  1:596379‑M1/81‑76 (MQ=255)
                                                                                                                                                                                                                               ttcatctccttcttcgtccttgaagctgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagtcgatggtagacggtaacgcctacgagttgctgctggatctgttcgaaaccaaaatcgaacagttggcagatgaaattgaa  <  1:271357‑M1/226‑224 (MQ=255)
                                                                                                                                                                                                                               tGCATttccttctgtttctttgaagatgcggaaggtcccgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagtcgatggtagacggtaacgcctacgagttgctgctggatctgttcgaaaccaaaatcgaacagttggcagatgaaattgaa  <  1:221369‑M1/228‑224 (MQ=255)
                                                                                                                                                                                                                                 cATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcttgcccgtagccagtcgatggtagacggtaacgcctacgcgttgctgctggatctgttcgaaaccaaaatcgaaaagttggaaggtaaaattga   >  2:291038‑M1/1‑3 (MQ=255)
                                                                                                                                                                                                                                   |                                                                                                                                                                                                                               
TCCCGGTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAA  >  NC_000913/4001418‑4001867

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.