Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 4,001,645 Δ5 bp 100% coding (220‑224/951 nt) corA → magnesium/nickel/cobalt transporter

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4001645 4001649 5 83 [0] [0] 83 corA magnesium/nickel/cobalt transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40016440 (0.000)77 (1.540) 57/414 NT 100% coding (219/951 nt) corA magnesium/nickel/cobalt transporter
?NC_000913 4001650 = 0 (0.000)coding (225/951 nt) corA magnesium/nickel/cobalt transporter

GTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAATTGAA  >  NC_000913/4001423‑4001872
                                                                                                                                                                                                                                   |                                                                                                                                                                                                                              
tcccggtcatgctgagcccattgcaacgggaaaataaccgactgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgacccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatc                                                                                                                                                                                                                                <  1:494867‑M2/1‑1 (MQ=255)
tcccggtaatggtgagcgcatttcacctggaaaataaccgactggcccggcgggaagtcgaagagtcacaacccctggtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatc                                                                                                                                                                                                                                <  1:624859‑M2/1‑1 (MQ=255)
   cggtcatgctgagcgcatttcaactggaaaataaccgacttgaccggcttgaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatct                                                                                                                                                                                                                               <  1:493022‑M2/2‑1 (MQ=255)
         tgctgactgcatttcagatggaaaattaccggctgaccggggtggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttctt                                                                                                                                                                                                                        <  1:291773‑M2/9‑1 (MQ=255)
          gctgagcgcatttcaactggaaaataaccgactgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcataggcacggttctttgaagacgaggacggcctgcatAtccttctttt                                                                                                                                                                                                                      >  1:617358‑M2/218‑226 (MQ=255)
                   atttcaactggaaaataaccgtctgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAg                                                                                                                                                                                                             <  1:592810‑M2/20‑1 (MQ=255)
                     ttcaactggaaaataaccgactgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgccgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagactcggcacgtttctttgaagacgacgacggcctccatCTCCTTCTTCTTCTTTGAAGa                                                                                                                                                                                                            >  1:278537‑M2/207‑227 (MQ=255)
                        aatgggaacataaccgattgacccggcgggaaatcgaagggtcacaaccccttggaaatgccggatggattgatcttgtcgaaccggacggcgacgggcggctgcgcgtacaatctgaacttggccagagccttgcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCg                                                                                                                                                                                                        <  2:432940‑M2/25‑1 (MQ=255)
                        aactggaaaatacccggctgacccggctggaagtcgaagagtcacaaccccttgtaaaggcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCg                                                                                                                                                                                                        <  1:605571‑M2/25‑1 (MQ=255)
                               aaaaacccgggtgacccgggcggaattcgaaggtgcactaccccttgtaaatgcgttatggattgctcttgtcgaaccggaacacgacggcggcctgcgcgtacaatctgaacttggccagagccttgcaccccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATc                                                                                                                                                                                                 <  2:359348‑M2/32‑1 (MQ=255)
                                  taacccgtcgccccggggggacgtcgaagagtcacaaccccttggaaatgcagtatggattgatcttgccgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACg                                                                                                                                                                                              <  2:618233‑M2/35‑1 (MQ=255)
                                       gactgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagctcggcaacccgcccggaactggaagacatcgaaggatcggcacgtttctttgaagccgacgaaggccggcacCTCCTTCTTCTTCTTTGaagatgcggaaggtacagccggt                                                                                                                                                                                         >  1:324897‑M2/189‑217 (MQ=255)
                                       gactgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggacgacatcgaagcatcggcacgtttctttgaagccaacgacggccggcctCTCCTTCTTCTTCTTTGAAGTTGCGGAAGAGCACCCcgga                                                                                                                                                                                         >  2:213421‑M2/189‑227 (MQ=255)
                                       gactgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGt                                                                                                                                                                                         <  1:421558‑M2/40‑1 (MQ=255)
                                        actgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggaccgtttctttgaagacgacgacggcctgcatCTCCTTCTCCTTCTTTGGATGTGCGGAAGGTCAATccggga                                                                                                                                                                                        >  1:600007‑M2/188‑226 (MQ=255)
                                            acccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcccgtttttttgacgacgacgacgccctgcatCTCCTTCTCTTTCTTTGAAGATGCGGAAAATACCCCCGGTAACTc                                                                                                                                                                                    >  2:447265‑M2/184‑228 (MQ=255)
                                                ggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgggcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACt                                                                                                                                                                                <  1:88909‑M2/49‑1 (MQ=255)
                                                 gctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTTTTCTTTGAAGATGCGGAAGATCACGCCGGTAAACCcaccg                                                                                                                                                                               >  2:542253‑M2/179‑226 (MQ=255)
                                                          cgaagagtccacaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTa                                                                                                                                                                      <  1:338309‑M2/59‑1 (MQ=255)
                                                             agggtccaaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgccgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTAcc                                                                                                                                                                    <  1:431310‑M2/61‑1 (MQ=255)
                                                              ggttacccaccccttggagattgattagggattgatctggtcgaaccgggcgacggcgagcacctgcgggtacaatctgaaattggccaggacctggcaacccgcccggaactggaagacatcgaatcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAGGATCACGCCGGTAACTCCACTGTGGCATTTACCa                                                                                                                                                                   <  2:257321‑M2/62‑1 (MQ=255)
                                                                   acaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATc                                                                                                                                                                 >  1:400398‑M2/161‑224 (MQ=255)
                                                                      accccttggatattgagtatggattgatcttggtgaaccggacgacgacgggcgcctgcgtgtacaatcggaagttggccagagccgggcaacccgcccggaactggaagacaacgaagcatcggcaagtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATg                                                                                                                                                          <  2:278537‑M2/71‑1 (MQ=255)
                                                                       ccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATg                                                                                                                                                          <  1:542253‑M2/71‑1 (MQ=255)
                                                                           ttgtaaatgcagtctggattgaccttggcgaaccggacgacgacgagcgcctgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtcg                                                                                                                                                      <  1:343665‑M2/75‑1 (MQ=255)
                                                                             gtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtcgtc                                                                                                                                                    <  1:204809‑M2/77‑1 (MQ=255)
                                                                                    caggagggattgaccttgccgaaccggacgacgacgagggactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTAct                                                                                                                                            <  1:436636‑M2/85‑1 (MQ=255)
                                                                                       tatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATAACGCCGGTAACTCCCCTGTGGCATTTACCATCCGGGATGTTCGTCTGTTTActct                                                                                                                                          >  1:518067‑M2/141‑227 (MQ=255)
                                                                                          ggattgatcttggcgacccggacgacgacgagcgactgcgcgtacaatcggaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcg                                                                                                                                       <  1:328915‑M2/90‑1 (MQ=255)
                                                                                                 tcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcctCTCCTTCTTCTTCTTTGAAGATGCGGAAAATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGGGATGGCCGCTGGTTTCCTctccctgaggg                                                                                                                                 >  2:52743‑M2/131‑224 (MQ=255)
                                                                                                 tcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAGGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTactctccgtgacgctg                                                                                                                               >  1:654960‑M2/131‑223 (MQ=255)
                                                                                                 tcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGCTCACGCCGGTAACTCCACTGTGGCCTTTCCCATCCGTGATGGTCGTCTGTTTTctctgcgtgagaggg                                                                                                                               >  2:366493‑M2/131‑224 (MQ=255)
                                                                                                 tcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagcgtg                                                                                                                               >  1:129653‑M2/131‑228 (MQ=255)
                                                                                                 tcttgtcgaacaggacgacgacgagcgactgcgcgtaaaatctgaacttggccagagcctggcaacccgcccgtaactggaagacatcgcagcatcggcacgtttctttgaagacgaggacggcctgcatCTCCTTCTTCTTCTTTGAAGAAGCGGGAGATCACGCCGGTAACTCCCCTGTGGCATTTACCATACGTGCTGGGCGTCTGTTTACGCTgcgtgagcgtg                                                                                                                               >  2:76342‑M2/131‑228 (MQ=255)
                                                                                                     gtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGTTGCGGAAGTTCCCGCCGGTAACTCCCCTGTGGCATTTACCCTCCCTGCTGGCCGCCTGTTTCTCCTCCGTGGGGGTGAacc                                                                                                                           >  2:587687‑M2/127‑227 (MQ=255)
                                                                                                     gtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcg                                                                                                                                       <  1:202158‑M2/90‑1 (MQ=255)
                                                                                                     gtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcg                                                                                                                                       >  2:202158‑M2/127‑216 (MQ=255)
                                                                                                     gtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGGAACTCCACTGAGGCATTTACCATCCGTGATGGTGGTCTGTTTACTCTCGCTGAGCGGGAACt                                                                                                                           >  1:428643‑M2/127‑228 (MQ=255)
                                                                                                       ccaaccggacgacgacgagccactgcgcttacaatctgaacttggccagggcctggcaccccgcccggacctggaagacatcgaagcatcggcccgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTg                                                                                                                          <  1:402961‑M2/103‑1 (MQ=255)
                                                                                                        gaaccggaccgcgacgggcggctgcgtgtacaatcggaacttgcgcagagcctggcaccccgcccgagactggaagacatcgaatcatcggcaagtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGcc                                                                                                                        <  2:427723‑M2/105‑1 (MQ=255)
                                                                                                          accggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTCCTCTGCGTGAGCGTGAACTg                                                                                                                          >  1:159329‑M2/122‑224 (MQ=255)
                                                                                                           ccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTTTGGCATTTACCATCCGGGCTGGTCGTCTGTTTATTCTCCGTGAGCGGGAACtgccccc                                                                                                                     >  2:151770‑M2/121‑226 (MQ=255)
                                                                                                             ggacaacgacgagcgacggggcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTTTTTACTCTGCGTGAGCGTGAACTGCCCGCtt                                                                                                                   <  1:587687‑M2/110‑1 (MQ=255)
                                                                                                              gacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGGTAGTGTCGTCTGTTTACTCTGCGTGCGCGTGAACTGGCCGCttt                                                                                                                  >  2:467428‑M2/118‑228 (MQ=255)
                                                                                                               acgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGGCGTTTTACTCTGCGTGGCCGGGAACTGCCCCCtttt                                                                                                                 >  2:620545‑M2/117‑228 (MQ=255)
                                                                                                                   cgccggccgcttgcgcgtaacatctgaatttggccacggcctggcaacccgcccggacctggaagacatcgaagcatcggcacgtttctttgaagccgacgacggcctgcttCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTc                                                                                                             <  2:324897‑M2/116‑1 (MQ=255)
                                                                                                                                          ctgaacttggccgggcccttgccccccgcccggaactggaagacaacgaagcaccggcacttttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTGTAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGc                                                                                      <  2:518067‑M2/139‑1 (MQ=255)
                                                                                                                                          ctgaacttggccagggcctggccacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGc                                                                                      <  1:54699‑M2/139‑1 (MQ=255)
                                                                                                                                          ctgaacttggccagagcctggcaacccgcccggaactgaaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGc                                                                                      <  1:568115‑M2/139‑1 (MQ=255)
                                                                                                                                             aacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcgcgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGCAGATCACGCCGGCAACTCCACTGTGGCCTTTCCCATCCGTGATGGTCGTCTGTTTACCCTGCGTGAGCGTGACCTGCCCGCTTTTCTTCTTTCTGGTATGGGTGCCCGGAGCCAg                                                                                   >  2:444663‑M2/87‑228 (MQ=255)
                                                                                                                                              aggtggccggaccctgggagcccggccggaacgggaagaactccaaccttcggcacctttctttgaaggcgacgccggcccgcatCTCCTTTTTTGTCTTTGAAGATGGGGAAGATCACGCCGGTAACTCCTCTGTGGCATTTACCATCCGTGATGGTCGTTTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGt                                                                                  <  2:428643‑M2/143‑1 (MQ=255)
                                                                                                                                              acttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTCCCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTACCGTATGCGTGCCCGTAGccaat                                                                                  >  2:566747‑M2/86‑226 (MQ=255)
                                                                                                                                                   gccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTcc                                                                                                                                                                                   >  2:211764‑M2/81‑126 (MQ=255)
                                                                                                                                                   gccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCCTCCGTGATGGTCGTCTGTTTACTCTGCGGGAGCGTGAACGGCCCGCTTTTCGTCGGTATCGTATGCGTGCCCGTAGCCCTTCGAt                                                                              >  2:152353‑M2/81‑227 (MQ=255)
                                                                                                                                                   gccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTCCTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGAt                                                                              >  1:476468‑M2/81‑227 (MQ=255)
                                                                                                                                                   gccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGGCTGTATCGTATGCGTGCCCGTAGCCAGTCgag                                                                              >  1:166761‑M2/81‑226 (MQ=255)
                                                                                                                                                   gccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGCCTGTATTGAATCCGTGCCCGTGACCAGTCGAt                                                                              >  1:576818‑M2/81‑227 (MQ=255)
                                                                                                                                                   gccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGCCTGTATCGTATGCGTGCCCGTAGCCAGTCGAt                                                                              >  1:281732‑M2/81‑227 (MQ=255)
                                                                                                                                                    ccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCa                                                                                                                                                                                  <  1:211764‑M2/47‑1 (MQ=255)
                                                                                                                                                        agcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTATTCTGCGTGAGCGGGAACTGCCCGCTTTTCGGCTGTATCGTATGCGTgcccgtgcccagacactgggcac                                                                        >  2:532898‑M2/76‑217 (MQ=255)
                                                                                                                                                             ggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTa                                                                                                                                                                                        >  1:526882‑M2/71‑111 (MQ=255)
                                                                                                                                                             ggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCATGCCCGTAGCCAGTCGATGGTAGACGGTa                                                                   >  1:301990‑M2/71‑228 (MQ=255)
                                                                                                                                                             ggcaacccgcccggaactggaagacaccgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTa                                                                   <  1:467428‑M2/158‑1 (MQ=255)
                                                                                                                                                              gccccccccccggaactggaaagacttgaagcctcgcccggtttctttgaagacggcgccggccggcatCTCCTTTGTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGGGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTaa                                                                  <  2:600007‑M2/159‑1 (MQ=255)
                                                                                                                                                              gcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTaa                                                                                                                                                                                       <  2:526882‑M2/42‑1 (MQ=255)
                                                                                                                                                                  cccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGc                                                               >  1:34216‑M2/66‑227 (MQ=255)
                                                                                                                                                                         gggactggaagacatcgaagcatcggcacgtttttttgaaggcgtcgccggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCCCTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGt                                                       <  2:617358‑M2/170‑1 (MQ=255)
                                                                                                                                                                           aactggaagccatccaagcatcggctggtttctttgaagacgccgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGtt                                                      <  1:45627‑M2/171‑1 (MQ=255)
                                                                                                                                                                           aactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCCCGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGtt                                                      <  1:447265‑M2/171‑1 (MQ=255)
                                                                                                                                                                            actggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGGATGCGGTCCCGTAGCCAGGCGAGGGTAGAGGGTAACCCCTACGAGttgt                                                    >  2:457076‑M2/56‑227 (MQ=255)
                                                                                                                                                                               ggaagcctccgaagcatcggcacgtttctttgaaggcgacgacggcctgcatCTCCTGCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTtgctgc                                                 <  2:181964‑M2/176‑1 (MQ=255)
                                                                                                                                                                                      atcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACCGTGGCCTTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCTTATGCGTGCCCGTAGCCAGTCGCGGGTAGCCGGTAACGCCTACGCGTTGCTGCTGGGTCt                                          >  2:342435‑M2/46‑228 (MQ=255)
                                                                                                                                                                                                 ggcgcttttctttgaagacgacgacggcctgaatCTCCCTCTTCTTCTTGGAAGATGCGGAAGAGCACGCGGGTAACCCCACGGGGGCATTTACCATCCGTGATGGTCGTCTGTTTTCTCTGCGTGAGCGTGAACTGCCCGCTTGTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCa                               <  2:476468‑M2/194‑1 (MQ=255)
                                                                                                                                                                                                        ttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTATACGGTAACGCCTCACAGTTGCTGCTGGATCTGTTCGAaaccaaaaagga                        >  2:64813‑M2/28‑224 (MQ=255)
                                                                                                                                                                                                           tttgaaagcgacgccggcctgcatCTCCTTTTGCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACa                     <  1:213421‑M2/204‑1 (MQ=255)
                                                                                                                                                                                                                 gacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGc               <  1:151770‑M2/210‑1 (MQ=255)
                                                                                                                                                                                                                         cggcctgcatTCCCTTCTTCTTCTTTGAAGGTGCGGAAGATCGCGCCGGTAACTCCACGGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGaaa       <  2:576818‑M2/218‑1 (MQ=255)
                                                                                                                                                                                                                           gcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAAt      <  1:620545‑M2/219‑1 (MQ=255)
                                                                                                                                                                                                                            cctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtc                                                                                                                                                       >  2:596379‑M2/8‑81 (MQ=255)
                                                                                                                                                                                                                             ctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtcg                                                                                                                                                      <  1:596379‑M2/75‑1 (MQ=255)
                                                                                                                                                                                                                              ttcatCTCCTTCTTCGTCCTTGAAGCTGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAATTGaa  <  1:271357‑M2/223‑1 (MQ=255)
                                                                                                                                                                                                                              tgcatTTCCTTCTGTTTCTTTGAAGATGCGGAAGGTCCCGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAATTGaa  <  1:221369‑M2/223‑1 (MQ=255)
                                                                                                                                                                                                                                catCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCTTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGCGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAAAAGTTGGAAGGTAAAATTGa   >  2:291038‑M2/4‑225 (MQ=255)
                                                                                                                                                                                                                                   |                                                                                                                                                                                                                              
GTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAATTGAA  >  NC_000913/4001423‑4001872

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.