Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 3,815,859 Δ82 bp 100% [rph][rph] [rph], [rph]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3815859 3815940 82 77 [0] [0] 77 [rph]–[rph] [rph],[rph]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 38158580 (0.000)74 (1.550) 53/394 NT 100% pseudogene (24/48 nt) rph ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH
?NC_000913 3815941 = 0 (0.000)pseudogene (609/669 nt) rph ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

TTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACG  >  NC_000913/3815714‑3816167
                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                   
agatcgcgcccggtattaaacagcccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcc                                                                                                                                                                                                                                     <  2:366701‑M2/1‑1 (MQ=255)
      cgcccggtattaaacagcccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgcccctaatcttacttttctacagccaaaaaaaaggcgactcatcagtcgccttaaaaatcagttttcccgcgccgccttctgcCGCcccc                                                                                                                                                                                                                               >  2:468640‑M2/222‑228 (MQ=255)
      cgcccggtattaaacagcccggcgttgaagaaataagggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTcccc                                                                                                                                                                                                                               >  1:178332‑M2/222‑228 (MQ=255)
         ccggtattaaacagcccggctttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTg                                                                                                                                                                                                                             <  1:614890‑M2/9‑1 (MQ=255)
            gtattaaacagcccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaagcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttcctcCGTCCCCCGCAc                                                                                                                                                                                                                          >  2:615616‑M2/216‑227 (MQ=255)
                       cccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaatttaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGc                                                                                                                                                                                                                            >  2:118333‑M2/205‑214 (MQ=255)
                       cccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaatgccactcatcagtcgccttaaaaatcattttgacagcgccgccttcttcCGTCCCCTGCACttcaatgaatga                                                                                                                                                                                                              >  2:230302‑M2/205‑224 (MQ=255)
                       cccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttccgcCGCCCCCTGCACTTCAATGATgc                                                                                                                                                                                                               >  2:168766‑M2/205‑227 (MQ=255)
                       cccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccaccgccgccttctccCGTACCCTGCACTTcaataatggg                                                                                                                                                                                                              >  2:638711‑M2/205‑226 (MQ=255)
                       cccggcgttgaagaaataggggcttttgagcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgacttcactcatcatcttacttttctacagccaaaaaaaaggcgactcatcagtcgccttaaaaattagttcgccatcgcccacttctgcGGTCCCCTGCACTTCAATCATacg                                                                                                                                                                                                              >  1:53695‑M2/205‑228 (MQ=255)
                        ccggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaatttaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCa                                                                                                                                                                                                                           <  1:118333‑M2/11‑1 (MQ=255)
                        ccggcgttaaaaaaaaaggggcgtttgcgcacggatctccgcggaaactcgccaagctttaacacctgcttgctaagcgcaaattcaagaaactggcgctgataggttttcatgccttcgctcctcatcgtacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgcgc                                                                                                                                                                                                             <  2:611350‑M2/25‑1 (MQ=255)
                         cggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgcgc                                                                                                                                                                                                             <  1:468640‑M2/25‑1 (MQ=255)
                         cggcgttgaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgcacccttctgcCGCCCCCTGCACGTCAATGATGCGcc                                                                                                                                                                                                            >  1:651876‑M2/203‑228 (MQ=255)
                                gaagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTcc                                                                                                                                                                                                                                 >  1:633126‑M2/196‑200 (MQ=255)
                                 aagaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTccc                                                                                                                                                                                                                                <  2:633126‑M2/6‑1 (MQ=255)
                                   gaaataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCg                                                                                                                                                                                                    <  1:63506‑M2/34‑1 (MQ=255)
                                     aataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtca                                                                                                                                                                                                <  1:586070‑M2/38‑1 (MQ=255)
                                      ataggggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttcccatcgccgccttctccCGTCCCCTGCACTTCAATGATGCGCCCCTCTTCGGtcat                                                                                                                                                                                               >  1:590319‑M2/190‑228 (MQ=255)
                                           ggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttacaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATCCACCCGTCTTCGATCATCACTa                                                                                                                                                                                          >  1:170348‑M2/185‑228 (MQ=255)
                                           ggcttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGGCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTa                                                                                                                                                                                          >  1:324248‑M2/185‑228 (MQ=255)
                                             cttttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgccaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccatcgcccccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGCCTTCGGCCATCACTAc                                                                                                                                                                                        >  2:78816‑M2/183‑227 (MQ=255)
                                               tttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaacttcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagccaaaaaaaaggcgacttatcagtcgccttacaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTCCGt                                                                                                                                                                                      >  1:460706‑M2/181‑227 (MQ=255)
                                               tttgcgcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaattaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccaccgccgccttctgcCGTCCCCTGCACTTCACTGATGCGCCCGCCTTCGGCCATCTCTCCGt                                                                                                                                                                                      >  1:52415‑M2/181‑227 (MQ=255)
                                                    gcccggatttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccatctgcCCTACCCTGCACTTCAATTATGCGCCCGTCTTCGGTCACACCTACGTTCAtgc                                                                                                                                                                                >  2:579963‑M2/176‑227 (MQ=255)
                                                         gatttcagtgtaaacctgccaacattaaaccccgtcttgctaagcgcaaaatcaatgacctggcgctgataggggttcatgccttcgctcctcatcttacttttctacagacaaaaaaagggcgacgcagcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGt                                                                                                                                                                            <  2:33808‑M2/57‑1 (MQ=255)
                                                          atttcagcgtaaactcgccaaactttaacccctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGtct                                                                                                                                                                          <  1:169850‑M2/59‑1 (MQ=255)
                                                          atttcagcgtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGtct                                                                                                                                                                          <  1:544780‑M2/59‑1 (MQ=255)
                                                          atttcagcgtaaactcgccaaacttgaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGtct                                                                                                                                                                          <  1:617502‑M2/59‑1 (MQ=255)
                                                                  gtaaactcgccaaactttaacccctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCa                                                                                                                                                                  <  1:242901‑M2/67‑1 (MQ=255)
                                                                  gtaaactcgccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCCTCACTCCGTTCATTTCGGTTCCTGCGGc                                                                                                                                                                   >  1:549475‑M2/162‑227 (MQ=255)
                                                                    taactccccaaactttaacccctgcttgctaagcgcaaattaaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttgtctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCaga                                                                                                                                                                <  2:651876‑M2/69‑1 (MQ=255)
                                                                    aaactctccaacatttaacccctgtttgctaagcgcaaattcaataaactggccctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgacccatcagtcgccttaaaaatcagttggccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCaga                                                                                                                                                                <  2:558627‑M2/69‑1 (MQ=255)
                                                                     aacccgccaaactttagcgccttgctgcgaagggcaaattcaaaagactggcgctgttgttgtttcctgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCaga                                                                                                                                                                <  2:52415‑M2/69‑1 (MQ=255)
                                                                         ctccaacacttaacccctgcttgctaagcggaaattcaaaaaactggcgatgatatggtttcatgccttcgcccctcatcttacttttctacaggcaaaaaaaaggcgactcatcagtcgacttaaaaatcagttggccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCtt                                                                                                                                                           <  2:368368‑M2/74‑1 (MQ=255)
                                                                           ccaaactttaacacctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGGCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGCAAGAGTCTTCa                                                                                                                                                         >  1:412619‑M2/153‑228 (MQ=255)
                                                                                           gcttgctaagcgcacattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTCCGTTCATGTCGGTCTCTGCGTCAGAGTCTTCAACGGattccaagtcc                                                                                                                                          >  1:244086‑M2/137‑222 (MQ=255)
                                                                                           gcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAtcc                                                                                                                                          >  1:24441‑M2/137‑226 (MQ=255)
                                                                                           gcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGCCGGTCCCTGCGGCAGAGTCTTCACCCGattccaaaccc                                                                                                                                          >  2:262301‑M2/137‑222 (MQ=255)
                                                                                                   agcgcaaattcaataaactggcgctgatatggattcatgccttcgctcctcatcttacttttctacagacaaaacaaaggagactcatcagtcgccttcaaaatcagtttgccagcgccgccttctgcCGTCCCCTTCACTTCAATGATGCGCCCGTCTCCGTTCATCACTACGATCCTGTCATTCTCTGCGGCCGAGTCTTTCACGTATTCCAAAACGCAAACCGCt                                                                                                                                 >  2:189950‑M2/129‑228 (MQ=255)
                                                                                                     cgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTc                                                                                                                               >  1:551571‑M2/127‑228 (MQ=255)
                                                                                                             taataaactggcgtttatatggtttcatgccttcgctcctcatcttcattttgatcagacaaaaaaaaggcgacccatcagtcgccttaaaaatcagtttgccagggccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGCCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTca                                                                                                                       <  2:590319‑M2/110‑1 (MQ=255)
                                                                                                                     tggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCCGAATTCCg                                                                                                               >  1:431449‑M2/111‑228 (MQ=255)
                                                                                                                      ggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACCGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCg                                                                                                               >  1:393113‑M2/110‑228 (MQ=255)
                                                                                                                       ggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTccc                                                                                                                                                                                                                                >  2:623559‑M2/109‑114 (MQ=255)
                                                                                                                        gcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTcccc                                                                                                                                                                                                                               <  1:623559‑M2/7‑1 (MQ=255)
                                                                                                                                      catgccttcgctcctcatcttacttttctacagacaaaaaaaaggccactcatcagtcgctgtaaaaatcagtttgccagcgcctccttctgcCGTCCCCTTCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCTGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTc                                                                                                                        <  1:351002‑M2/109‑1 (MQ=255)
                                                                                                                                      cacttcttcgacccacatcttgcatttccgcaagcaaaaaaaaggcgcctcactggactccttaaaaatcagtttgccagcgccgcattctgcCGTCCCCTGCCCGTCAATGATGCGCCCGTCTGCGGTCATCACTAGGTTCATGTCGTTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTa                                                                                               <  2:53695‑M2/134‑1 (MQ=255)
                                                                                                                                       atgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTCCTCCGTTCACAATTACGCCAGAAactgcgcgtga                                                                                              >  1:502982‑M2/93‑222 (MQ=255)
                                                                                                                                       atgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTAAGTTCCTGTCGGTCTCTGCGGCAGAGTATTCACCGGATTCCAGATCCCAAAACGCTTCCCCGTTCACCATTCCGACAGAAACTGCGGCTAcc                                                                                             >  2:425922‑M2/93‑228 (MQ=255)
                                                                                                                                        tgccttcgctcctcatcttacttttctacagacaaaaaaaagtcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCa                                                                                            >  1:555396‑M2/92‑228 (MQ=255)
                                                                                                                                        tgccttcgctcctcatcctacgtttccaccgacaaaaaaaaggcgactcatcagtcgtcttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCa                                                                                            <  1:246398‑M2/137‑1 (MQ=255)
                                                                                                                                         tccctccctcctcatttttcttttacacagacaaaaaaaaggctgctcatcaggcgccttaaaactcagtttgccagcgccgacttctgcCTTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACGACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCa                                                                                            <  2:502982‑M2/137‑1 (MQ=255)
                                                                                                                                            ttcgctcctcatcttactttttctcagacaaaaaaaaggcgactcatcagtcgccttaaaaagcagtttgcccgcgccgccttctgcCGGCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATccc                                                                                        <  2:324248‑M2/141‑1 (MQ=255)
                                                                                                                                            ttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGCATTCCAGATCGCAAACCGCTTCGCCGTTACCAATTCCGACAAAAAATGCGGCCACCAcccc                                                                                        >  2:395929‑M2/88‑228 (MQ=255)
                                                                                                                                                       tgtgtacttttcacagacaaaaaaaaggctactcatcaggcgacttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGGACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCTGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGAt                                                                             <  1:160966‑M2/152‑1 (MQ=255)
                                                                                                                                                       tcttattttttcacagacaaaaaaaaggcgacccaacagtcgtcttaaaaatcagtttgcccgcgccgccttctgcCGTCCCCTGGACTTCAATGATGCGCCCGTCTTCGGTCATCACTTCGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGAt                                                                             <  2:587801‑M2/152‑1 (MQ=255)
                                                                                                                                                                tctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCCCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACACTCCCTTTAATCGGATTGGTTTTc                                                                     >  1:230171‑M2/68‑227 (MQ=255)
                                                                                                                                                                 ctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCt                                                                                       >  2:426496‑M2/67‑208 (MQ=255)
                                                                                                                                                                  taaagacaaaaaaaaggcgacccatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCtt                                                                                      <  1:426496‑M2/143‑1 (MQ=255)
                                                                                                                                                                   acagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGCCAGAAACTGAGGCTACCATCCCTTTCATCGGATTGGTTTTCACCt                                                                 >  1:11352‑M2/65‑228 (MQ=255)
                                                                                                                                                                    cagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGCCTTCAACGTATTCCAGATCGCAAACCGCTTCCCCGTTCCCAATTCCCACCGAAACCGCGGCCACCATACCCTTCACCGGATTGGgtttcgcct                                                                 >  2:238486‑M2/64‑223 (MQ=255)
                                                                                                                                                                       acaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTCCGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCCCAATTCCGACAGAACCTGCGGCTACCATCCCTTTCACCGGCTTGGTTTTCACCTTGc                                                              >  1:241304‑M2/61‑227 (MQ=255)
                                                                                                                                                                       acaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGcc                                                             >  2:520960‑M2/61‑228 (MQ=255)
                                                                                                                                                                       acaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGc                                                              >  1:5574‑M2/61‑227 (MQ=255)
                                                                                                                                                                       acaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATCTCCGTCTCTGCGGCAGAGTCTTCACCGTATTCCAGATCGCAAACCGCTTCCCCGTTCCCCATTCCTCCCGAAACTGCGCCTCCCATCCCTTTCATCGGCTTGgttttcaaattcc                                                              >  2:57151‑M2/61‑221 (MQ=255)
                                                                                                                                                                                     actcatccgtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCACAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCCCCGTTACCAGTTCCGCCCGACACTGCGGCCACCATCCCTTTCACCGGATAGGGTTTAGACTTGCcgttttccccaccc                                                >  2:112475‑M2/47‑221 (MQ=255)
                                                                                                                                                                                          tcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGt                                          <  1:520960‑M2/187‑1 (MQ=255)
                                                                                                                                                                                           tcgtctccttaaaaattagtttgccagcgccgccttctgcCGTCCCCTGCACGTCAATGATGCGCCCTTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTa                                         <  1:189950‑M2/188‑1 (MQ=255)
                                                                                                                                                                                                 ccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCa                                    >  1:389298‑M2/35‑227 (MQ=255)
                                                                                                                                                                                                 ccttaaaaagcaggttgcccgcgccccctttggcCGTCCCCTGCACTTCAATGATGCGCCCGGCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTTAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCa                                    <  1:78816‑M2/193‑1 (MQ=255)
                                                                                                                                                                                                   ttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCTCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGAATGGTTTTCAGCTTGCCGTTTTCCACCCGCTTCtgaagcgccaca                                 >  2:231483‑M2/33‑224 (MQ=255)
                                                                                                                                                                                                        aatcagtttgccagcgcccgcttcggcCGTCCCCTGCCCTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAg                            <  1:504770‑M2/201‑1 (MQ=255)
                                                                                                                                                                                                          tcattttgccagcgcccccttcgtcCGTCCCCTGCTCTTCAATGAGTCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAgcg                          <  2:555396‑M2/203‑1 (MQ=255)
                                                                                                                                                                                                            agtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGCCAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTCCCAgcgc                         >  1:535872‑M2/24‑227 (MQ=255)
                                                                                                                                                                                                                tgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTCCGGCTACCATCCCTTTCATCGGATTGGGTTTAACCTTGCCGTTTTCCACCATCTTCTGTAGCCCATctaccacagcc                        >  1:327511‑M2/20‑219 (MQ=255)
                                                                                                                                                                                                                                  cCGTCCCCTGCCCTTCAATGTTGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCCCAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACg  <  1:262553‑M2/227‑1 (MQ=255)
                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                   
TTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCTTTCATCGGATTGGTTTTCAGCTTGCCGTTTTCCACCAGCTTCTGTAGCGCATCTACCAGCGCCACGCAGGCACCCGTAATCGACG  >  NC_000913/3815714‑3816167

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.