Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 458,790 IS186 (–) +6 bp :: Δ1 bp 81.2% intergenic (+90/‑93) clpX → / → lon ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 458790 =14 (0.180)62 (0.770) 43/418 NT 81.1% intergenic (+90/‑98) clpX/lon ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La
?NC_000913 608008 = NA (NA)noncoding (2/1345 nt) IS186 repeat region
* ? NC_000913 = 45879514 (0.180)59 (0.740) 48/416 NT 80.4% intergenic (+95/‑93) clpX/lon ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La
?NC_000913 = 609351 NA (NA)noncoding (1345/1345 nt) IS186 repeat region

CACTGCTCGATACCATGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACAtccc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/458561‑458795
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCACTTCTGGGGGGGAAATCCAGCGATGGCTGGATTATGTCGTCA  <  NC_000913/609351‑609111
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
CACTGCTCGATACCATGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCC                                                                                                                                                                                                                                               >  1:703313/1‑239
  CTGCTCGATTCCATGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCAT                                                                                                                                                                                                                                             <  1:1055502/239‑1
  CTGCTCGATACCATGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCAT                                                                                                                                                                                                                                             <  2:452532/239‑1
  CTGCACGATACCATGTACGATCTGGCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCAT                                                                                                                                                                                                                                             <  1:1008298/239‑1
          TACCATGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCT                                                                                                                                                                                                                                      <  1:969333/238‑1
              ATGTACGATCGGCCGGCCATGGAAGACGTCGAAAAAGTGGTTAACGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTT                                                                                                                                                                                                                                 <  1:388383/239‑1
               TGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGTATTTATCTCCCCTTTAATTTTTCCCCTATT‑CTCGCCGTTGAATGTGGGGGAAACATCCCCTAAaactgagggac                                                                                                                                                                                                                                >  2:690574/1‑228
               TGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGCTTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTTAATGTGGGGGAACAATCCCAAAAagacaaaataa                                                                                                                                                                                                                                >  2:925799/1‑228
               TGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCAATT‑CTCGGCGTTGAATGTGGGGGAAAAATCCCATAAGCGCTAACTTA                                                                                                                                                                                                                                >  1:491943/1‑239
               TGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATATCCCCTTTAATTTTTCCTCTTTT‑CTCGGCGTGAAATATGGGGGAAACATCCCCTAACCGCTAACTTA                                                                                                                                                                                                                                >  1:699949/1‑239
               TGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGGGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTTCTCTATT‑CTCGGCGGTGAATGGGGGGGAAACATCCCAAAAACGCTAAATTA                                                                                                                                                                                                                                >  2:282296/1‑239
               TGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGGGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCTTCTATT‑CTCGGCGTTGAATTTGGGGGAAACATCCCATAACCGCTAACTTA                                                                                                                                                                                                                                >  1:309507/1‑239
                 TACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGACATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGCGGGGGAAACATCCCATAAGAGCCAACTTAcg                                                                                                                                                                                                                              >  1:8185/1‑237
                    GATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTT                                                                                                                                                                                                                                 >  2:970164/1‑233
                    GATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTT                                                                                                                                                                                                                                 <  1:970164/233‑1
                      TCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTG                                                                                                                                                                                                                         >  1:982188/1‑239
                       gTGCCGGCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCACTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGA                                                                                                                                                                                                                        <  1:402719/238‑1
                        TGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTACTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAA                                                                                                                                                                                                                       >  2:396472/1‑239
                         GCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAA                                                                                                                                                                                                                       >  1:789895/1‑238
                         GCCGTCCATGGAAGACGTCGAAAAAGTGGGTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAAC                                                                                                                                                                                                                      <  1:925799/239‑1
                             TCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATC                                                                                                                                                                                                                  >  2:187515/1‑239
                               CATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTG                                                                                                                                                                                                                >  1:215872/1‑239
                                                        ATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCG                                                                                                                                                                                       >  1:490932/1‑239
                                                                 TCGGTTATTTTTGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACG                                                                                                                                                                               <  2:490932/238‑1
                                                                  CGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGAT                                                                                                                                                                             <  1:245668/239‑1
                                                                   GGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCAAAGACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCCACTGAAGAAAGCGACGCCACGGTGCACCGTAAAGAAGAg                                                                                                                                                                             >  2:456922/1‑237
                                                                    GTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCCTACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAACCATCCCATAAGCCCTAACTTAAGGGTTTACCCATCGGAAAAATGCGCAACCTCGGGGCCTCGTTAAGACGAag                                                                                                                                                                            >  2:458469/1‑236
                                                                           ATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGT                                                                                                                                                                    >  1:812049/1‑239
                                                                             GGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGTGGCATCGTTAAAACGAGGCCcaccgtct                                                                                                                                                                  >  1:476722/1‑231
                                                                                      AAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATT                                                                                                                                                           <  1:282296/237‑1
                                                                                        ACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAAACATATGAAGAATGCGACGCTTCGGTGCCTCGTTAAGACGATGCACCGCGTTCTTAGATTGCGT                                                                                                                                                       >  1:942233/1‑239
                                                                                                TGATTTCAGGAAAGCCGGAATCCCAACAGGTATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGG                                                                                                                                               <  1:880422/239‑1
                                                                                                  ATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCT                                                                                                                                             <  1:396472/239‑1
                                                                                                     TATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTC                                                                                                                                          <  1:801205/239‑1
                                                                                                       TGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAG                                                                                                                                        <  1:707906/239‑1
                                                                                                            AGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGAT                                                                                                                                    >  1:256104/1‑238
                                                                                                            AGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGAAGGCGGTCAGGGAa                                                                                                                                    >  2:728028/1‑237
                                                                                                            AGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGAGGCCCCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGAT                                                                                                                                    >  1:394250/1‑238
                                                                                                                   agccaAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCC                                                                                                                             <  1:458469/233‑1
                                                                                                                              CATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATG                                                                                                                     <  1:187515/235‑1
                                                                                                                                      GAATAATTAACCTTTCCCATACAATTAGTTAACCTAAAAGGGGGAATTTCAACTCCCCTTTCATTTTTCGTCGATT‑CTCGGCGTTGAAGTCGGGAGAAACCTCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAATAATGAGACCCATCGGTGCCACGTTAAGACGATGGCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAG                                                                                                         <  2:354080/239‑1
                                                                                                                                       AATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGa                                                                                                        >  1:731067/1‑238
                                                                                                                                       AATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTAGCGTTCTTCAATTGCGTTTTGTGGGCTGTCAGGTAATCTTTCCCACCAATGGCCCCCTGGAAG                                                                                                         >  2:604107/1‑238
                                                                                                                                           ATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCc                                                                                                    >  1:376743/1‑238
                                                                                                                                                  gTTCCCATTCAATTAGTTACCCAAAAAGGGGGGATTGTATCTCCCTTTTAATTTTTCCTCTATT‑CTCGGCTTTGAATGTGGGGGAAACATCCCATAATCGCTAACTTTAGGGTTGAACCATCTGAAGCATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAACTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCCCCTGTAAGCTCCAGATGA                                                                                               <  1:590887/236‑1
                                                                                                                                                    TCCCATTCAATTAGTTAACCAAAAAGGGGGGATTTTATCTCACCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGTGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCAT                                                                                           <  1:604107/239‑1
                                                                                                                                                                      CCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCCCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAA                                                                         <  1:728028/239‑1
                                                                                                                                                                                GGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTG                                                                                      <  2:199062/216‑1
                                                                                                                                                                                GGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTG                                                                                      >  1:199062/1‑216
                                                                                                                                                                                GGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCAT                                                                                                                                                                                                                                             >  1:319013/1‑65
                                                                                                                                                                                GGGATGTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCAT                                                                                                                                                                                                                                             <  2:319013/65‑1
                                                                                                                                                                                 GGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCCCGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGT                                                                >  1:1051092/1‑237
                                                                                                                                                                                             CCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGA                                                   >  1:805008/1‑238
                                                                                                                                                                                                 TTAATTTTTTCTTCATTCCACGGC‑TTGAATTGTGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCCTCTGAAGAATGCTACGCCTCGGTGCCTCGTTAAGACCATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGG                                              <  2:703313/239‑1
                                                                                                                                                                                                 TTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCGCGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGG                                              <  1:922842/239‑1
                                                                                                                                                                                                   atTTTTTCCTTTTTT‑TACCGCGTTGAATGTGGGGGAAACCTCCCAGAAGCGCTAAGTTAAGGGTTGAACCCTCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCA                                            <  2:287772/237‑1
                                                                                                                                                                                                       TTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCACT                                          >  1:504165/1‑237
                                                                                                                                                                                                                TT‑CTCGGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCGTCAATTGCGGTTTGTAGGCTGTCAGGGATACTTTCCACCAAATGCCCACCTGTAAGCTCCAGAAACCCATTTTTGTTATTCTCCAACCCAGGTTAGTTCTCCTTTTTGGTACCGCCAATTTTGGGGGGGc                               >  2:790719/1‑238
                                                                                                                                                                                                                      GGCGTTGAATGTGGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCATGGATACTGTCCAACGAATGGCCCCCTGTACGCTCCAGGTGTCCATTTTTGTTATTTTCCCCAACACGTTAGTGCTTCTTTCCGGATCCGGAACTTCTGGGGGGGAAATCa                          >  2:82447/1‑238
                                                                                                                                                                                                                          gTGAATGTGGGGGGAACATCCCATAAGCGGTAACTTAAGGTTTGAACCATCTGAAGAATGCGACGCCGCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCGTGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCACTTCTGGGGGGGAAATCCAGC                       <  2:982188/237‑1
                                                                                                                                                                                                                           TGAATGTGGGGGAAACAACCCATAAGCGATACCTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGGCGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCACTTCTGGGGGGGAAATCCAGCt                      <  1:743487/238‑2
                                                                                                                                                                                                                              ATGGGGGGTAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCTCCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCACTTCTGGGGGGGAAATCCAGCGATGG                  <  1:259296/239‑1
                                                                                                                                                                                                                               ttttGGGGAAACATCCCTTAAGCGCTAATTTAAGGGTTGAACCAATTGAAGAATGGGGCGCCTGGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGGTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCACTTCTGGGGGGGAAATCCAGCGATGG                  <  2:376743/234‑1
                                                                                                                                                                                                                                    GGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCACTTCTGGGGGGGAAATCCAGCGATGGCTGGAT            >  1:970415/1‑239
                                                                                                                                                                                                                                    GGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCACTTCTGGGGGGGAAATCCAGCGATGGCTGGAT            >  1:206801/1‑239
                                                                                                                                                                                                                                     GGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTT                                                                                    >  1:5524/1‑166
                                                                                                                                                                                                                                     GGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTT                                                                                    <  2:5524/166‑1
                                                                                                                                                                                                                                       AAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCC                                                                                                                             >  1:486000/1‑123
                                                                                                                                                                                                                                       AAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCC                                                                                                                             <  2:486000/123‑1
                                                                                                                                                                                                                                         ACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCCCAACGAGTTAGTTCTTCTTTTCGGATCCGGCACTTCTGGGGGGGAAATCCAGCGATGGCTGGATTATG        >  1:65281/1‑238
                                                                                                                                                                                                                                             CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCACTTCTGGGGGGGAAATCCAGCGATGGCTGGATTATGTCGTC   >  1:929322/1‑239
                                                                                                                                                                                                                                              CCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCACTTCTGGGGGGGAAATCCAGCGATGGCTGGATTCTGTCGTCA  >  1:697894/1‑239
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
CACTGCTCGATACCATGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATT‑CTCGGCGTTGAATGTGGGGGAAACAtccc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/458561‑458795
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCACTTCTGGGGGGGAAATCCAGCGATGGCTGGATTATGTCGTCA  <  NC_000913/609351‑609111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.