BRESEQ :: Marginal Predictions

breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Marginal new junction evidence (sorted from low to high skew)
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3592584 =	NA (NA)	3 (0.040)	3/396	NT	4.1%	noncoding (21/99 nt)	RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	3592648 =	71 (0.940)	3 (0.040)	3/396	NT	4.1%	noncoding (85/99 nt)	RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	1426168 =	99 (1.220)	5 (0.060)	5/404	NT	5.0%	intergenic (+86/‑286)	ydaY/tmpR	pseudogene, Rac prophage;Phage or Prophage Related/Rac prophage; pseudogene, tail protein family;Phage or Prophage Related; putative alpha helix protein
*	?	NC_000913	1426189 =	97 (1.250)	5 (0.060)	5/404	NT	5.0%	intergenic (+107/‑265)	ydaY/tmpR	pseudogene, Rac prophage;Phage or Prophage Related/Rac prophage; pseudogene, tail protein family;Phage or Prophage Related; putative alpha helix protein
*	?	NC_000913	1113532 =	74 (0.910)	3 (0.040)	3/400	NT	4.2%	intergenic (+126/‑47)	opgH/yceK	OPG biosynthetic ACP‑dependent transmembrane UDP‑glucose beta‑1,2 glycosyltransferase; nutrient‑dependent cell size regulator, FtsZ assembly antagonist/outer membrane integrity lipoprotein
*	?	NC_000913	1113561 =	67 (0.870)	3 (0.040)	3/400	NT	4.2%	intergenic (+155/‑18)	opgH/yceK	OPG biosynthetic ACP‑dependent transmembrane UDP‑glucose beta‑1,2 glycosyltransferase; nutrient‑dependent cell size regulator, FtsZ assembly antagonist/outer membrane integrity lipoprotein