mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4516891 = | 121 (1.230) | 5 (0.050) | 5/492 | NT | 4.1% | coding (827/954 nt) | fecR | anti‑sigma transmembrane signal transducer for ferric citrate transport; periplasmic FecA‑bound ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator |
| ? | NC_000913 | 4516925 = | 117 (1.230) | coding (793/954 nt) | fecR | anti‑sigma transmembrane signal transducer for ferric citrate transport; periplasmic FecA‑bound ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator | |||||
| * | ? | NC_000913 | 4102317 = | 85 (0.860) | 4 (0.040) | 4/492 | NT | 4.5% | coding (628/984 nt) | kdgT | 2‑keto‑3‑deoxy‑D‑gluconate transporter |
| ? | NC_000913 | 4102353 = | 86 (0.900) | coding (664/984 nt) | kdgT | 2‑keto‑3‑deoxy‑D‑gluconate transporter | |||||
| * | ? | NC_000913 | = 3481456 | 128 (1.300) | 3 (0.030) | 3/506 | NT | 2.3% | coding (168/1914 nt) | yheS | ABC‑F family protein predicted regulatory ATPase |
| ? | NC_000913 | 3481460 = | 127 (1.300) | coding (172/1914 nt) | yheS | ABC‑F family protein predicted regulatory ATPase | |||||
| * | ? | NC_000913 | 3216165 = | 122 (1.240) | 4 (0.040) | 4/490 | NT | 3.5% | coding (327/765 nt) | yqjH | putative siderophore interacting protein |
| ? | NC_000913 | 3216247 = | 101 (1.070) | coding (245/765 nt) | yqjH | putative siderophore interacting protein | |||||
| * | ? | NC_000913 | = 2375833 | 82 (0.840) | 4 (0.040) | 4/504 | NT | 4.7% | coding (130/963 nt) | menC | O‑succinylbenzoyl‑CoA synthase |
| ? | NC_000913 | 2514274 = | NA (NA) | noncoding (2/1345 nt) | IS186 | repeat region | |||||
| * | ? | NC_000913 | 2375828 = | 85 (0.880) | 3 (0.030) | 3/502 | NT | 3.4% | coding (135/963 nt) | menC | O‑succinylbenzoyl‑CoA synthase |
| ? | NC_000913 | = 2515617 | NA (NA) | noncoding (1345/1345 nt) | IS186 | repeat region | |||||
| * | ? | NC_000913 | = 1751528 | 109 (1.100) | 3 (0.030) | 3/496 | NT | 2.6% | coding (197/648 nt) | ydhW | FNR, Nar, NarP‑regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex |
| ? | NC_000913 | = 1751544 | 118 (1.230) | coding (181/648 nt) | ydhW | FNR, Nar, NarP‑regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex | |||||
| * | ? | NC_000913 | = 1066842 | 92 (0.930) | 3 (0.030) | 3/490 | NT | 3.2% | intergenic (+16/+22) | agp/yccJ | glucose‑1‑phosphatase/inositol phosphatase/uncharacterized protein |
| ? | NC_000913 | = 1066847 | 94 (0.990) | intergenic (+21/+17) | agp/yccJ | glucose‑1‑phosphatase/inositol phosphatase/uncharacterized protein | |||||