| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP025533 | 2921785 = | 116 (0.740) | 21 (0.130) | 20/496 | 17.3 | 15.3% | coding (813/1671 nt) | CYL77_13825 | Na+/H+ antiporter subunit D |
| ? | CP025533 | = 3041097 | NA (NA) | intergenic (+7/‑308) | CYL77_14395/CYL77_14400 | IS30 family transposase ISCg2/YibE/F family protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGCTTGGCGTTCCACCAGACCGACCACCAGGAACAGGGAAGTCTGAACCAGAATGTGGTGGATTGCGTAGAAGATCGCACCAGACAAACCCTGTGCAGATCCAAGGGCTACGCCGAAGATCATGTAGCCGATGTGGCTGACCAGAGTAAATGACAACAAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP025533/2922031‑2921785‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAAAATCCCTGACCAATCCATTCGTATTCTCATTCGACCCACGCTGCCACGGCGAATGAGGATCACAGAAAAACA < CP025533/3041097‑3040867 GGCTTGGCGTTCCACCAGACCGACCACCAGGAACAGGGAAGTCTGAACCAGAATGTGGTGGATTGCGTAGAAGATCGCACCAGACAAACCCTGTGCAGATCCAAGGGCTACGCCGAAGATCATGTAGCCGATGTGGCTGACCAGAGTAAATGACAACAAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGG < 1:29546/249‑1 CCACCAGACCGACCACCAGGAACAGGGAAGTCTGAACCAGAATGTGGTGGATTGCGTAGAAGATCGCACCAGACAAACCCTGTGCAGATCCAAGGGCTACGCCGAAGATCATGTAGCCGATGTGGCTGACCAGAGTAAATGACAACAAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATC > 1:822781/1‑249 GAAGTCTGAACCAGAATGTGGTGGATTGCGTAGAAGATCGCACCAGACAAACCCTGTGCAGATCCAAGGGCTACGCCGAAGATCATGTAGCCGATGTGGCTGACCAGAGTAAATGACAACAAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTT < 1:716886/249‑1 TCTGAACCAGAATGTGGTGGATTGCGTAGAAGATCGCACCAGACAAACCCTGTGCAGATCCAAGGGCTACGCCGAAGATCATGTAGCCGATGTGGCTGACCAGAGTAAATGACAACAAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATA > 1:1179400/1‑249 GGATTGCGTAGAAGATCGCACCAGACAAACCCTGTGCAGATCCAAGGGCTACGCCGAAGATCATGTAGCCGATGTGGCTGACCAGAGTAAATGACAACAAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTT < 1:68373/249‑1 ATCGCACCAGACAAACCCTGTGCAGATCCAAGGGCTACGCCGAAGATCATGTAGCCGATGTGGCTGACCAGAGTAAATGACAACAAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTT > 2:1443489/1‑249 ACCAGAGCAAACATGTGCAGATCCAAGGGCTACGCCGAAGATCATGTAGCCGATGTGGCTGACCAGAGTAAATGACAACAAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGC < 2:289601/249‑1 ACAAACCCTGTGCAGATCCAAGGGCTACGCCGAAGAGCATGTAGCCGATGTGGCTGACCAGAGTAAATGACAACAAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCG < 1:661754/249‑1 GCAGATCCAAGGGCTACGCCGAAGATCATGTAGCCGATGTGGCTGACCAGAGTAAATGACAACAAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCA < 1:1238732/249‑1 CGCCGAAGATCATGTAGCCGATGTGGCTGACCAGAGTAAATGACAACAAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTG > 1:1055766/1‑249 GCCGATGTGGCTGACCAGAGTAAATGACAACAAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTT < 1:1449644/249‑1 CCGATGTGGCTGACCAGAGTAAATGACAACAAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTA > 2:775204/1‑249 GATGTGGCTGACCAGAGTAAATGACAACAAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACT > 2:116178/1‑249 CCAGAGTAAATGACAACAAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATT > 2:1412441/1‑249 CCAGAGTAAATGACAACAAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATT > 1:1137836/1‑249 ACAACAAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGG > 1:1117778/1‑249 AAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAA < 1:835795/249‑1 AACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAAA > 1:253313/1‑249 CAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAAAATCCCTGACCAATCCATTCGTATTCTCATTCGACCCACG > 2:39119/1‑249 GAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAAAATCCCTGACCAATCCATTCGTATTCTCATTCGACCCACGCTGC < 2:291176/249‑1 AGCATGGTGTCAAGGGATGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAAAATCCCTGACCAATCCATTCGTATTCTCATTCGACCCACGCTGCCACGGCGAATGAGGATCACAGAAAAACA < 1:424611/249‑1 GGCTTGGCGTTCCACCAGACCGACCACCAGGAACAGGGAAGTCTGAACCAGAATGTGGTGGATTGCGTAGAAGATCGCACCAGACAAACCCTGTGCAGATCCAAGGGCTACGCCGAAGATCATGTAGCCGATGTGGCTGACCAGAGTAAATGACAACAAACGTTTGATATCGTTTTGCGCCATCGCGCCCAAAATACCAATGAGCATGGTGGCGAGTGCCACCCACATCAGCATGGTGTCAAGGGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP025533/2922031‑2921785‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAAAATCCCTGACCAATCCATTCGTATTCTCATTCGACCCACGCTGCCACGGCGAATGAGGATCACAGAAAAACA < CP025533/3041097‑3040867 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |