| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 475712 | 16 (0.600) | 4 (0.150) | 3/208 | 2.4 | 20.0% | coding (304/405 nt) | h16_A0451 | conserved hypothetical protein |
| ? | AM260479 | 475718 = | 16 (0.600) | coding (310/405 nt) | h16_A0451 | conserved hypothetical protein | |||||
TCGGGCTGGTACGTGACCGACTTCCGCGGCGGCAGCGCCGGCACGCCGACAGCGACCGGCGCCGCTGGTGGCGCCGCTGCAGCGGCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260479/475622‑475712‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGGCGGCGGCTGAATCGCCGGC > AM260479/475718‑475740 TCGGGCTGGTACGTGACCGACTTCCGCGGCGGCAGCGCCGGCACGCCGACAGCGACCGGCGCCGCTGGTGGCGCCGCTGCAGCGGC‑GCCACCAGCGGCGccgg > 1:699943/1‑99TCGGGCTGGTACGTGACCGACTTCCGCGGCGGCAGCGCCGGCACGCCGACAGCGACCGGCGCCGCTGGTGGCGCCGCTGCAGCGGC‑GCCACCAGCGGCGccgg < 2:699943/103‑5 GACTTCCGCGGCGGCAGCGCCGGCACGCCGACAGCGACCGGCGCCGCTGGTGCCGCCGCTGCAGCGGC‑GCCACCAGCGGCGGCTGAATCGCCGGC > 1:719392/1‑95 GACTTCCGCGGCGGCAGCGCCGGCACGCCGACAGCGACCGGCGCCGCTGGTGCCGCCGCTGCAGCGGC‑GCCACCAGCGGCGGCTGAATCGCCGGC < 2:719392/95‑1 TCGGGCTGGTACGTGACCGACTTCCGCGGCGGCAGCGCCGGCACGCCGACAGCGACCGGCGCCGCTGGTGGCGCCGCTGCAGCGGCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260479/475622‑475712‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGGCGGCGGCTGAATCGCCGGC > AM260479/475718‑475740 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |