| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | = 834171 | 23 (0.750) | 4 (0.180) | 4/156 | 1.9 | 20.4% | intergenic (+43/‑242) | h16_B0739/h16_B0740 | flavodoxin reductase (ferredoxin‑NADPH reductase) family 1/MFS transporter, AAHS family |
| ? | AM260480 | = 834145 | 14 (0.610) | intergenic (+17/‑268) | h16_B0739/h16_B0740 | flavodoxin reductase (ferredoxin‑NADPH reductase) family 1/MFS transporter, AAHS family | |||||
AAGGTTGCCCCGATCATCGCGACAGCGTGCTCAGCAACAGCGAGCGCGCCAGCAACAAGACCATGATGGTGTGCGTGTCGGGGTGCAAGGGCAGCAAGCTGGTGCTGGACTTGTAATTTCGCGATTGTGTTCTCCCCTCTCCCGCGCGCGGGAGAGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260480/834013‑834171‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccctctcccgcgcgcgggagaggggAGAACACAATCGCGAAATTACAAGTCCAGCACCAGCTTGCTGCCCTTGCACCCCGACACGCACACCATCATGGTCTTGTTGCTGGCGCGCTCGCTGTTGCTGAGCACGCTGTCGC < AM260480/834145‑834031 AAGGTTGCCCCGATCATCGCGACAGCGTGCTCAGCAACAGCGAGCGCGCCAGCAACAAGACCATGATGGTGTGCGTGTCGGGGTGCAAGGGCAGCAAGCTGGTGCTGGACTTGTAATTTCGCGATTGTGTTCTC < 2:1145204/134‑1 CCCGATCATCGCGACAGCGTGCTCAGCAACAGCGAGCGCGCCAGCAACAAGACCATGATGGTGTGCGTGTCGGGGTGCAAGGGCAGCAAGCTGGTGCTGGACTTGTAATTTCGCGATTGTGTTCTCCCCTCTCC > 1:1183186/1‑134 CCCGATCATCGCGACAGCGTGCTCAGCAACAGCGAGCGCGCCAGCAACAAGACCATGATGGTGTGCGTGTCGGGGTGCAAGGGCAGCAAGCTGGTGCTGGACTTGTAATTTCGCGATTGTGTTCTCCCCTCTCC > 1:303301/1‑134 CCCGATCATCGCGACAGCGTGCTCAGCAACAGCGAGCGCGCCAGCAACAAGACCATGATGGTGTGCGTGTCGGGGTGCAAGGGCAGCAAGCTGGTGCTGGACTTGTAATTTCGCGATTGTGTTCTCCCCTCTCC < 1:943104/134‑1 GCGACAGCGTGCTCAGCAACAGCGAGCGCGCCAGCAACAAGACCATGATGGTGTGCGTGTCGGGGTGCAAGGGCAGCAAGCTGGTGCTGGACTTGTAATTTCGCGATTGTGTTCTCCCCTCTCCCGCGCGCGG < 2:666556/133‑1 CGCCAGCAACAAGACCATGATGGTGTGCGTGTCGGGGTGCAAGGGCAGCAAGCTGGTGCTGGACTTGTAATTTCGCGATTGTGTTCTCCCCTCTCCCGCGCGCGGGAGAGGGG > 2:405876/1‑113 CGCCAGCAACAAGACCATGATGGTGTGCGTGTCGGGGTGCAAGGGCAGCAAGCTGGTGCTGGACTTGTAATTTCGCGATTGTGTTCTCCCCTCT < 1:1132839/94‑1 CGTGTCGGGGTGCAAGGGCAGCAAGCTGGTGCTGGACTTGTAATTTCGCGATTGTGTTCTCCCCTC < 1:1152222/66‑1 CGTGTCGGGGTGCAAGGGCAGCAAGCTGGTGCTGGACTTGTAATTTCGCGATTGTGTTCTCCCCTC > 2:1152222/1‑66 GGGGTGCAAGGGCAGCAAGCTGGTGCTGGACTTGTAATTTCGCGATTGTGTTCTCCCCTCTCCCGCGCGCGGGAGAGGGGAGAACACAATC < 2:960432/91‑1 GTGCAAGGGCAGCAAGCTGGTGCTGGACTTGTAATTTCGCGATTGTGTTCTCCCCTCTCCCGCGCGCG < 1:862920/68‑1 GTGCAAGGGCAGCAAGCTGGTGCTGGACTTGTAATTTCGCGATTGTGTTCTCCCCTCTCCCGCGCGCG > 2:862920/1‑68 TGCAAGGGCAGCAAGCTGGTGCTGGACTTGTAATTTCGCGATTGTGTTCTCCCCTCTCCCGCGCGCGGGAGAGGGGAGAACACAATCGCGAAATTACAAGTCCAGCACCAGCTTGCTGCCCTTGCACCCCGACA > 1:1007880/1‑134 CAAGGGCAGCAAGCTGGTGCTGGACTTGTAATTTCGCGATTGTGTTCTCCCCTCTCCCGCGCGCGGGAGAGGGGAGAACACAATCGCGAAATTACAAGTCCAGCACCAGCTTGCTGCCCTTGCACCCCGACACG > 2:303301/1‑134 GCTGGTGCTGGACTTGTAATTTCGCGATTGTGTTCTCCCCTCTCC < 2:26974/45‑1 CTGGACTTGTAATTTCGCGATTGTGTTCTCCCCTCTCCCGCGCGCGGGAG < 2:454613/50‑1 TGGACTTGTAATTTCGCGATTGTGTTCTCCCCTCTCCCGC > 2:752159/1‑40 GATTGTGTTCTCCCCTCTCCCGCGCGCGGGAGAGGGGAGAACACAATCGCGAAATTACAAGTCCAGCACCAGCTTGCTGCCCTTGCACCCC < 1:960432/91‑1 CCCCTCTCCCGCGCGCGGGAGAGGGGAGAACACAATCGCGAAATTACAAGTCCAGCACCAGCTTGCTGCCCTTGCACCCCGACACGCACACCATCATGGTCTTGTTGCTGGCG > 1:405876/1‑113 CTCCCGCGCGCGGGAGAGGGGAGAACACAATCGCGAAATTACAAGTCCAG < 1:454613/50‑1 TCCCGCGCGCGGGAGAGGGGAGAACACAATCGCGCAATTACAAGTCCAGCACCAGCTTGCTGCCCTTGCACCCCGACACGCACACAATCATGGTCTTGTTGCTGGCGCGCTCGCTGTTGCTGAGCACGCTGTCG > 2:1183186/1‑134 CCCGCGCGCGGGAGAGGGGAGAACACAATCGCGAAATTACAAGTCCAGCACCAGCTTGCTGCCCTTGCACCCCGACACGCACACCATCATGGTCTTGTTGCTGGCGCGCTCGCTGTTGCTGAGCACGCTGTCGC > 1:999191/1‑134 CCGCGCGCGGGAGAGGGGAGAACACAATCGCGAAATTACAAGTCCAGCACCAGCTTGCTGCCCTTGCACCCCGACACGCACACCATCATGGTCTTGTTGCTGGCGCGCTCGCTGTTGCTGAGCACGCTGTCGC < 2:1007880/133‑1 GCGGGAGAGGGGAGAACACAATCGCGAAATTACAAGTCCA > 1:752159/1‑40 GGAGAGGGGAGAACACAATCGCGAAATTACAAGTCCAGCACCAGC < 1:26974/45‑1 AGAGGGGAGAACACAATCGCGAAATTACAAGTCCAGCACCAGCTTGCTGCCCTTGCACCCCGACACGCACACCATCATGGTCTTGTTGCTGGCG < 2:1132839/94‑1 AAGGTTGCCCCGATCATCGCGACAGCGTGCTCAGCAACAGCGAGCGCGCCAGCAACAAGACCATGATGGTGTGCGTGTCGGGGTGCAAGGGCAGCAAGCTGGTGCTGGACTTGTAATTTCGCGATTGTGTTCTCCCCTCTCCCGCGCGCGGGAGAGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260480/834013‑834171‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccctctcccgcgcgcgggagaggggAGAACACAATCGCGAAATTACAAGTCCAGCACCAGCTTGCTGCCCTTGCACCCCGACACGCACACCATCATGGTCTTGTTGCTGGCGCGCTCGCTGTTGCTGAGCACGCTGTCGC < AM260480/834145‑834031 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |