| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | 854841 = | 18 (0.590) | 6 (0.220) | 5/186 | 1.9 | 29.2% | coding (668/876 nt) | h16_B0756 | Enoyl‑CoA hydratase |
| ? | AM260480 | 854888 = | 13 (0.480) | coding (621/876 nt) | h16_B0756 | Enoyl‑CoA hydratase | |||||
CGTGTTCTCGGCCCAGGAAGCGCATGAGCGCGGCCTGGTGCGCTCGCTGCACGCGCCGGAAGACCTGCTGCCTGCCGCCCAGGCCATTGCCCGCGAGATCGCCGCCAATGCCGCGCCGGTTTCGGTAGCGATCTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/854978‑854841‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgatctcgcgGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAGGCCGCGCTCATGCGCTTCCTGGGCCGAGAACACG > AM260480/854888‑854978 CGTGTTCTCGGCCCAGGAAGCGCATGAGCGCGGCCTGGTGCGCTCGCTGCACGCGCCGGAAGACCTGCTGCCTGCCGCCCAGGCCATTGCCCGCGAGATCGCCGCCAATGCCGCGCCGGTTTCGGTAGCGATCT > 2:325780/1‑134CGTGTTCTCGGCCCAGGAAGCGCATGAGCGCGGCCTGGTGCGCTCGCTGCACGCGCCGGAAGACCTGCTGCCTGCCGCCCAGGCCATTGCCCGCGAGATCGCCGCCAATGCCGCGCCGGTTTCGGTAGCGATCT > 2:358686/1‑134CGTGTTCTCGGCCCAGGAAGCGCATGAGCGCGGCCTGGTGCGCTCGCTGCACGCGCCGGAAGACCTGCTGCCTGCCGCCCAGGCCATTGCCCGCGAGATCGCCGCCAATGCCGCGCCGGTTTCGGTAGCGATCT > 2:414705/1‑134 gctggCGCGAGATCGCCGCCAATGCCGCGCCGGTTTCGGTAGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAGGCCGCGCTCATGCGCTTCCTGGGCC > 1:253155/6‑134 AGATCGCCGCCAATGCCGCGCCGGTTTCGGTAGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAGGCCGCGCTCATGCGCTTCCTGGGCCGAGAACACG < 2:253155/134‑1 GATCGCCGCCAATGCCGCGCCGGTTTCGGTAGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCA < 1:452738/86‑1 GATCGCCGCCAATGCCGCGCCGGTTTCGGTAGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCA > 2:452738/1‑86 CGGTTTCGGTAGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAG < 1:290028/79‑1 CGGTTTCGGTAGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAG > 2:290028/1‑79 CGTGTTCTCGGCCCAGGAAGCGCATGAGCGCGGCCTGGTGCGCTCGCTGCACGCGCCGGAAGACCTGCTGCCTGCCGCCCAGGCCATTGCCCGCGAGATCGCCGCCAATGCCGCGCCGGTTTCGGTAGCGATCTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/854978‑854841‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgatctcgcgGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAGGCCGCGCTCATGCGCTTCCTGGGCCGAGAACACG > AM260480/854888‑854978 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |