New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AM260480 854841 =18 (0.590)6 (0.220) 5/186 1.9 29.2% coding (668/876 nt) h16_B0756 Enoyl‑CoA hydratase
?AM260480 854888 = 13 (0.480)coding (621/876 nt) h16_B0756 Enoyl‑CoA hydratase

ATCGGGTGGCTGGCGCCGGCCATGCGCCAGATCAGCTGGCGCGAGATCGCTACCGAAACCGGCGCGGCATTGGCGGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAGGCCGCGCTCATGCGCTTCCTGGGCCGAGAACACGCGGCCGGTATAGCACCATTC  >  AM260480/854802‑854998
                                                                                      |                                                                                                              
aTCGGGTGGCTGGCGCCGGCCATGCGCCAGATCAGCTGGCGCGAGATCGCTACCGAAACCGGCGCGGCATTGGCGGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCagc                                                                   >  1:358686/1‑132 (MQ=255)
aTCGGGTGGCTGGCGCCGGCCATGCGCCAGATCAGCTGGCGCGAGATCGCTACCGAAACCGGCGCGGCATTGGCGGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCagc                                                                   >  2:1002510/1‑132 (MQ=255)
   gggTGGCTGGCGCCGGCCATGCGCCAGATCAGCTGGCGCGAGATCGCTACCGAAACCGGCGCGGCATTGGCGGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCagcgagc                                                               <  2:617943/133‑1 (MQ=255)
          tggcGCCGGCCATGCGCCAGATCAGCTGGCGCGAGATCGCTACCGAAACCGGCGCGGCATTGGCGGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCtt                                                                                 <  1:416328/108‑1 (MQ=255)
          tggcGCCGGCCATGCGCCAGATCAGCTGGCGCGAGATCGCTACCGAAACCGGCGCGGCATTGGCGGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCtt                                                                                 >  2:416328/1‑108 (MQ=255)
                  gCCATGCGCCAGATCAGCTGGCGCGAGATCGCTACCGAAACCGGCGCGGCATTGGCGGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAGGCCGCGCTc                                               <  1:1002510/134‑1 (MQ=255)
                   ccATGCGCCAGATCAGCTGGCGCGAGATCGCTACCGAAACCGGCGCGGCATTGGCGGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAGGCCGCGCTCa                                              <  2:137453/134‑1 (MQ=255)
                     cggcgcCAGATCAGCTGGCGCGAGATCGCTACCGAAACCGGCGCGGCATTGGCGGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAGGCCGCGCTCATg                                            >  2:147681/3‑134 (MQ=255)
                          ccAGATCAGCTGGCGCGAGATCGCTACCGAAACCGGCGCGGCATTGGCGGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAg                                                        >  2:584024/1‑117 (MQ=255)
                          ccAGATCAGCTGGCGCGAGATCGCTACCGAAACCGGCGCGGCATTGGCGGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAg                                                        <  1:584024/117‑1 (MQ=255)
                           cAGATCAGCTGGCGCGAGATCGCTACCGAAACCGGCGCGGCATTGGCGGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAGGCCGCGCTCATGCGCTTc                                      >  2:81763/1‑134 (MQ=255)
                                 aGCTGGCGCGAGATCGCTACCGAAACCGGCGCGGCATTGGCGGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAGGCCGCGCTCATGCGCTTCCTGGGc                                >  1:325780/1‑134 (MQ=255)
                                  gctggcgcgagatcgccgccaatgccgcgccggtttcggtagcgatctcgcgGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAGGCCGCGCTCATGCGCTTCCTGGGcc                               >  1:253155‑M2/53‑134 (MQ=255)
                                           agatcgccgccaatgccgcgccggtttcggtagcgatctcgcgGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAGGCCGCGCTCATGCGCTTCCTGGGCCGAGAACAcg                      <  2:253155‑M2/91‑1 (MQ=255)
                                           AGATCGCTACCGAAACCGGCGCGGCATTGGCGGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAGGCCGCGCTCATGCGCTTCCTGGGCCGAGAACAcg                      >  2:325780‑M1/1‑134 (MQ=255)
                                           AGATCGCTACCGAAACCGGCGCGGCATTGGCGGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAGGCCGCGCTCATGCGCTTCCTGGGCCGAGAACAcg                      >  2:358686‑M1/1‑134 (MQ=255)
                                           AGATCGCTACCGAAACCGGCGCGGCATTGGCGGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAGGCCGCGCTCATGCGCTTCCTGGGCCGAGAACAcg                      >  2:414705‑M1/1‑134 (MQ=255)
                                            gatcgccgccaatgccgcgccggtttcggtagcgatctcgcgGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCa                                                                     <  1:452738‑M2/44‑1 (MQ=255)
                                            gatcgccgccaatgccgcgccggtttcggtagcgatctcgcgGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCa                                                                     >  2:452738‑M2/43‑86 (MQ=255)
                                                                cggtttcggtagcgatctcgcgGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAg                                                        >  2:290028‑M2/23‑79 (MQ=255)
                                                                cggtttcggtagcgatctcgcgGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAg                                                        <  1:290028‑M2/57‑1 (MQ=255)
                                                                cgGCATTGGCGGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAGGCCGCGCTCATGCGCTTCCTGGGCCGAGAACACGCGGCCGGTATAGCACCATTc  >  1:526414/1‑133 (MQ=255)
                                                                                      |                                                                                                              
ATCGGGTGGCTGGCGCCGGCCATGCGCCAGATCAGCTGGCGCGAGATCGCTACCGAAACCGGCGCGGCATTGGCGGCGATCTCGCGGGCAATGGCCTGGGCGGCAGGCAGCAGGTCTTCCGGCGCGTGCAGCGAGCGCACCAGGCCGCGCTCATGCGCTTCCTGGGCCGAGAACACGCGGCCGGTATAGCACCATTC  >  AM260480/854802‑854998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.