| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | 1877625 = | 17 (0.560) | 4 (0.150) | 4/184 | 2.2 | 22.2% | coding (216/732 nt) | h16_B1666 | chitooligosaccharide deacetylase |
| ? | AM260480 | 1877666 = | 13 (0.480) | coding (257/732 nt) | h16_B1666 | chitooligosaccharide deacetylase | |||||
CGAACACCGAGAAGTGCAGCCGGTGGTACATGCTGTGGTTCTCCACGGCGTGGCCGCGGCCGACGATCTCGCGCACCAGTTCCGGATGCGCCGCGGCGCGCGCGCCGACGCAGAAGAAGGTCGCGCGCGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/1877758‑1877625‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgcgcgccgCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCGGTCCCGGGCGCATGCTGCGCGACATCGGTGCC > AM260480/1877666‑1877790 CGAACACCGAGAAGTGCAGCCGGTGGTACATGCTGTGGTTCTCCACGGCGTGGCCGCGGCCGACGATCTCGCGCACCAGTTCCGGATGCGCCGCGGCGCGCGCGCCGACGCAGAAGAAGGTCGCGCGCGCGCCG > 1:359578/1‑134CGAACACCGAGAAGTGCAGCCGGTGGTACATGCTGTGGTTCTCCACGGCGTGGCCGCGGCCGACGATCTCGCGCACCAGTTCCGGATGCGCCGCGGCGCGCGCGCCGACGCAGAAGAAGGTCGCGCGCGCGC < 1:213328/132‑1CGAACACCGAGAAGTGCAGCCGGTGGTACATGCTGTGGTTCTCCACGGCGTGGCCGCGGCCGACGATCTCGCGCACCAGTTCCGGATGCGCCGCGGCGCGCGCGCCGACGCAGAAGAAGGTCGCGCGCGCGC > 2:213328/1‑132CGAACACCGAGAAGTGCAGCCGGTGGTACATGCTGTGGTTCTCCACGGCGTGGCCGCGGCCGACGATCTCGCGCACCAGTTCCGGATGCGCCGCGGCGCGCGCGCCGACGCAGAAGAAGGTCGCG > 1:533103/1‑125CGAACACCGAGAAGTGCAGCCGGTGGTACATGCTGTGGTTCTCCACGGCGTGGCCGCGGCCGACGATCTCGCGCACCAGTTCCGGATGCGCCGCGGCGCGCGCGCCGACGCAGAAGAAGGTCGCG < 2:533103/125‑1 CGGTGGTACATGCTGTGGTTCTCCACGGCGTGGCCGCGGCCGACGATCTCGCGCACCAGTTCCGGATGCGCCGCGGCGCGCGCGCCGACGCAGAAGAAGGTCGCGCGCGCGC < 1:132298/112‑1 CGGTGGTACATGCTGTGGTTCTCCACGGCGTGGCCGCGGCCGACGATCTCGCGCACCAGTTCCGGATGCGCCGCGGCGCGCGCGCCGACGCAGAAGAAGGTCGCGCGCGCGC > 2:132298/1‑112 CTCCACGGCGTGGCCGCGGCCGACGATCTCGCGCACCAGTTCCGGATGCGCCGCGGCGCGCGCGCCGACGCAGAAGAAGGTCGCGCGC < 1:732071/88‑1 CTCCACGGCGTGGCCGCGGCCGACGATCTCGCGCACCAGTTCCGGATGCGCCGCGGCGCGCGCGCCGACGCAGAAGAAGGTCGCGCGC > 2:732071/1‑88 GGCGCGCGCGCCGACGCAGAAGAAGGTCGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAAC > 1:966105/1‑96 GGCGCGCGCGCCGACGCAGAAGAAGGTCGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAAC < 2:966105/96‑1 ACGCAGAAGAAGGT‑‑CGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCGGTCCCGGG > 1:403829/1‑126 ACGCAGAAGAAGGT‑‑CGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCGGTCCCGGG < 2:403829/126‑1 cgtcgGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCGGTCCCGGGCGCATGCTGCGCGACATC > 1:1172774/6‑134 CGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCGGTCCCGGGCGCATGCTGCGCGACATAGGTG > 2:957692/1‑134 CGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCGGTCCCGGGCGCATGCTGCGCGACATCGGTGCC > 1:967257/1‑134 CGAACACCGAGAAGTGCAGCCGGTGGTACATGCTGTGGTTCTCCACGGCGTGGCCGCGGCCGACGATCTCGCGCACCAGTTCCGGATGCGCCGCGGCGCGCGCGCCGACGCAGAAGAAGGTCGCGCGCGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/1877758‑1877625‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgcgcgccgCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCGGTCCCGGGCGCATGCTGCGCGACATCGGTGCC > AM260480/1877666‑1877790 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |