| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | 1877625 = | 17 (0.560) | 4 (0.150) | 4/184 | 2.2 | 22.2% | coding (216/732 nt) | h16_B1666 | chitooligosaccharide deacetylase |
| ? | AM260480 | 1877666 = | 13 (0.480) | coding (257/732 nt) | h16_B1666 | chitooligosaccharide deacetylase | |||||
CCGCCCTCTGCCGATGATTGCGTGGCACTGACATTCGACGACGGCCCCAACCCGGCGTTGACGCCGCGCGTGCTCGACATGCTGGACCAGCACGGCGCGCGCGCGACCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCGGTCCCGGGCGCATGCTGCGCGACATCGGTGCC > AM260480/1877533‑1877790 | ccgccCTCTGCCGATGATTGCGTGGCACTGACATTCGACGACGGCCCCAACCCGGCGTTGACGCCGCGCGTGCTCGACATGCTGGACCAGCACGGCGCGCGCGCGACCTTCTTCTGCGTCGGCGCGCGcgccgc > 1:861191/1‑134 (MQ=255) aCATTCGACGACGGCCCCAACCCGGCGTTGACGCCGCGCGTGCTCGACATGCTGGACCAGCACGGCGCGCGCGCGACCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGAtcgt < 1:540996/134‑1 (MQ=255) cccAACCCGGCGTTGACGCCGCGCGTGCTCGACATGCTGGACCAGCACGGCGCGCGCGCGACCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGc < 1:623567/134‑1 (MQ=255) ttGACGCCGCGCGTGCTCGACATGCTGGACCAGCACGGCGCGCGCGCGACCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACca < 1:74779/134‑1 (MQ=255) gTGCTCGACATGCTGGACCAGCACGGCGCGCGCGCGACCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTacca > 1:396872/1‑134 (MQ=255) gACATGCTGGACCAGCACGGCGCGCGCGCGACCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCt < 2:861191/134‑1 (MQ=255) tGCTGGACCAGCACGGCGCGCGCGCGACCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCAc < 2:128488/134‑1 (MQ=255) aCGGCGCGCGCGCGACCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTc > 1:885756/1‑134 (MQ=255) CGGCGCGCGCGCGACCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCg > 1:359578‑M1/1‑134 (MQ=255) ggcgcgcgcgccgacgcagaagaaggtcgcgcgcgcgccgCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAAc < 2:966105‑M2/56‑1 (MQ=255) ggcgcgcgcgccgacgcagaagaaggtcgcgcgcgcgccgCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAAc > 1:966105‑M2/41‑96 (MQ=255) GCGCGCGCGCGACCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCg < 1:132298‑M1/112‑1 (MQ=255) GCGCGCGCGCGACCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCg > 2:132298‑M1/1‑112 (MQ=255) GCGCGCGCGCGACCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCg < 1:213328‑M1/132‑1 (MQ=255) GCGCGCGCGCGACCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCg > 2:213328‑M1/1‑132 (MQ=255) GCGCGCGACCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGgag < 1:732071‑M1/88‑1 (MQ=255) GCGCGCGACCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGgag > 2:732071‑M1/1‑88 (MQ=255) CGCGACCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCg > 1:533103‑M1/1‑125 (MQ=255) CGCGACCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCg < 2:533103‑M1/125‑1 (MQ=255) aCCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGgaga < 1:132850/82‑1 (MQ=255) aCCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGgaga > 2:132850/1‑82 (MQ=255) aCCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCGGTCCCGGGCGCAt < 2:396872/134‑1 (MQ=255) acgcagaagaaggtcgcgcgcgccgCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCGGTCCCggg > 1:403829‑M2/26‑126 (MQ=255) acgcagaagaaggtcgcgcgcgccgCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCGGTCCCggg < 2:403829‑M2/101‑1 (MQ=255) cgtcggcgcgcgccgCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCGGTCCCGGGCGCATGCTGCGCGACATc > 1:1172774‑M2/16‑134 (MQ=255) ggCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAAc > 2:75512/1‑69 (MQ=255) ggCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAAc < 1:75512/69‑1 (MQ=255) cgcgcgcgccgCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCGGTCCCGGGCGCATGCTGCGCGACATAGGTg > 2:957692‑M2/12‑134 (MQ=255) cgcgcgccgCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCGGTCCCGGGCGCATGCTGCGCGACATCGGTGcc > 1:967257‑M2/10‑134 (MQ=255) | CCGCCCTCTGCCGATGATTGCGTGGCACTGACATTCGACGACGGCCCCAACCCGGCGTTGACGCCGCGCGTGCTCGACATGCTGGACCAGCACGGCGCGCGCGCGACCTTCTTCTGCGTCGGCGCGCGCGCCGCGGCGCATCCGGAACTGGTGCGCGAGATCGTCGGCCGCGGCCACGCCGTGGAGAACCACAGCATGTACCACCGGCTGCACTTCTCGGTGTTCGGTCCCGGGCGCATGCTGCGCGACATCGGTGCC > AM260480/1877533‑1877790 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |