New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	1601171 =	18 (0.670)	5 (0.190)	4/204	2.0	21.0%	coding (171/1194 nt)	h16_A1475	acetylornithine deacetylase/Succinyl‑diaminopimelate desuccinylase or related deacylas
	?	AM260479	1601191 =	20 (0.760)					coding (191/1194 nt)	h16_A1475	acetylornithine deacetylase/Succinyl‑diaminopimelate desuccinylase or related deacylas

GCATCGCGCTGACCGAAGCCGACCGCAAGGGGCGCGACCTGGTGGTGCAGTGGTGCCGCGAGGCCGGGCTCGACGTGCGCGTCGACGAGATCGGCAACGTCTTCGCGCGCCGCGCCGGCAGCGACCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATCGACACCCAGCCCTCGGGCGGCAAGTTCGACGGCAACTTCGGCGTGCTGGCCGGCCTGGAAGTCATGCGCACGCTCGACGACCTGGGCATCGTCA  >  AM260479/1601047‑1601301                                                                                                                             |                                                                                                                                   gCATCGCGCTGACCGAAGCCGACCGCAAGGGGCGCGACCTGGTGGTGCAGTGGTGCCGCGAGGCCGGGCTCGACGTGCGCGTCGACGAGATCGGCAACGTCTTCGCGCGCCGCGCCGGCAGCGACCCCGAcgcg                                                                                                                           >  1:1025061/1‑134 (MQ=255) gCATCGCGCTGACCGAAGCCGACCGCAAGGGGCGCGACCTGGTGGTGCAGTGGTGCCGCGAGGCCGGGCTCGACGTGCGCGTCGACGAGATCGGCAACGTCTTCGCGCGCCGCGCCGGCAGCGACCCCGAcgcg                                                                                                                           >  1:342472/1‑134 (MQ=255) gCATCGCGCTGACCGAAGCCGACCGCAAGGGGCGCGACCTGGTGGTGCAGTGGTGCCGCGAGGCCGGGCTCGACGTGCGCGTCGACGAGATCGGCAACGTCTTCGCGCGCCGCGCCGGCAGCGACCCCGAcgcg                                                                                                                           >  1:589961/1‑134 (MQ=255)                  gcagACCGCAAGGGGCGCGACCTGGTGGTGCAGTGGTGCCGCGAGGCCGGGCTCGACGTGCGCGTCGACGAGATCGGCAACGTCTTCGCGCGCCGCGCCGGCAGCGACCCCGACGCGCGCGCCGTGGCCACCgg                                                                                                          >  2:319109/4‑134 (MQ=255)                            aGGGGCGCGACCTGGTGGTGCAGTGGTGCCGCGAGGCCGGGCTCGACGTGCGCGTCGACGAGATCGGCAACGTCTTCGCGCGCCGCGCCGGCAGCGACCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATc                                                                                                <  2:589961/134‑1 (MQ=255)                              gggCGCGACCTGGTGGTGCAGTGGTGCCGCGAGGCCGGGCTCGACGTGCGCGTCGACGAGATCGGCAACGTCTTCGCGCGCCGCGCCGGCAGCGACCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATCGa                                                                                              <  2:1025061/134‑1 (MQ=255)                                     aCCTGGTGGTGCAGTGGTGCCGCGAGGCCGGGCTCGACGTGCGCGTCGACGAGATCGGCAACGTCTTCGCGCGCCGCGCCGGCAGCGACCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATCGACACCCAg                                                                                       >  1:704854/1‑134 (MQ=255)                                             gtgCAGTGGTGCCGCGAGGCCGGGCTCGACGTGCGCGTCGACGAGATCGGCAACGTCTTCGCGCGCCGCGCCGGCAGCGACCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATCGACACCCAGCCCTCggg                                                                               <  2:704854/134‑1 (MQ=255)                                             gtgCAGTGGTGCCGCGAGGCCGGGCTCGACGTGCGCGTCGACGAGATCGGCAACGTCTTCGCGCGCCGCGCCGGCAGCGACCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATCGACACCCAGCCCTCggg                                                                               >  2:648276/1‑134 (MQ=255)                                                        ccGCGAGGCCGGGCTCGACGTGCGCGTCGACGAGATCGGCAACGTCTTCGCGCGCCGCGCCGGCAGCGACCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATCGACACCCAGCCCTCGGGCGGCAAGTTc                                                                     >  1:52477/1‑133 (MQ=255)                                                                      tCGACGTGCGCGTCGACGAGATCGGCAACGTCTTCGCGCGCCGCGCCGGCAGCGACCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATCGACACCCAGCCCTCGGGCGGCAAGTTCGACGGCAACTTCGGc                                                      >  2:65736/1‑134 (MQ=255)                                                                                    gacgaGATCGGCAACGTCTTCGCGCGCCGCGCCGGCAGCGACCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATCGACACCCAGCCCTCGGGCGGCAAGTTCGACGGCAACTTCGGCGTGCTGGCCGGCCt                                        <  1:65736/134‑1 (MQ=255)                                                                                      cgaGATCGGCAACGTCTTCGCGCGCCGCGCCGGCAGCGACCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATCGACACCCAGCCCTCGGGCGGCAAGTTCGACGGCAACTTCGGCGTGCTGGCCGGCCTg                                       >  2:310812/1‑133 (MQ=255)                                                                                           cccgagggctgggtgtcgatatggctgccggtggCCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATCGACACCCAGCCCTCGGGCGGCAAGTTCGACGGCAACTTCGGCGTGc                                                  <  2:247084‑M1/83‑1 (MQ=255)                                                                                           cccgagggctgggtgtcgatatggctgccggtggCCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATCGACACCCAGCCCTCGGGCGGCAAGTTCGACGGCAACTTCGGCGTGc                                                  >  1:247084‑M1/35‑117 (MQ=255)                                                                                                            cgccgcgccgGCAGCGACCCCGACGCGCGCGCCGTGGc                                                                                                                <  2:871039/38‑1 (MQ=255)                                                                                                            cgccgcgccgGCAGCGACCCCGACGCGCGCGCCGTGGc                                                                                                                >  1:871039/1‑38 (MQ=255)                                                                                                                      gCAGCGACCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATCGACACCCAGCCCTCGGGCGGCAAGTTCGACGGCAACTTCGGCGTGc                                                  >  2:910279/1‑90 (MQ=255)                                                                                                                      gCAGCGACCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATCGACACCCAGCCCTCGGGCGGCAAGTTCGACGGCAACTTCGGCGTGc                                                  <  1:910279/90‑1 (MQ=255)                                                                                                                        ggtggCCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATCGACACCCAGCCCTCGGGCGGCAAGTTCGACGGCAACTTCGGCGTGCTGGCCGGCCTGGAAGTCATGCGCACGCTCGACGACCTGGGCATCGt    <  1:162981‑M1/129‑1 (MQ=255)                                                                                                                          tggCCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATCGACACCCAGCCCTCGGGCGGCAAGTTCGACGGCAACTTCGGCGTGc                                                  <  2:466002‑M1/83‑1 (MQ=255)                                                                                                                          tggCCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATCGACACCCAGCCCTCGGGCGGCAAGTTCGACGGCAACTTCGGCGTGc                                                  >  1:466002‑M1/4‑86 (MQ=255)                                                                                                                          cGACCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATCGACACCCAGCCCTCGGGCGGCAAGTTCGACGGCAACTTCGGCGTGCTGGCCGGCCTGGAAGTCATGCGCACGCTCGACGACCTGGGCATCGTCa  <  2:342472/134‑1 (MQ=255)                                                                                                                             |                                                                                                                                   GCATCGCGCTGACCGAAGCCGACCGCAAGGGGCGCGACCTGGTGGTGCAGTGGTGCCGCGAGGCCGGGCTCGACGTGCGCGTCGACGAGATCGGCAACGTCTTCGCGCGCCGCGCCGGCAGCGACCCCGACGCGCGCGCCGTGGCCACCGGCAGCCATATCGACACCCAGCCCTCGGGCGGCAAGTTCGACGGCAACTTCGGCGTGCTGGCCGGCCTGGAAGTCATGCGCACGCTCGACGACCTGGGCATCGTCA  >  AM260479/1601047‑1601301

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.