| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | 1930349 = | 40 (1.360) | 8 (0.310) | 8/186 | 1.2 | 19.3% | coding (2771/2817 nt) | fdwA | Tungsten‑containing formate dehydrogenase alpha subunit |
| ? | AM260480 | 1930363 = | 32 (1.250) | coding (2757/2817 nt) | fdwA | Tungsten‑containing formate dehydrogenase alpha subunit | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCGGGGCGGTGTTCGTGCCGTTCTGCTATTACGAGGCGGCGATCAACAAGCTGACCAATGCGGCACTGGACCCCTTCGGCAAGATCCCGGAGTTCAAGTACTGCGCGGTGAAGATGGCACTGGGCGGCGCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/1930484‑1930349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcgcgccgccCAGTGCCATCTTCACCGCGCAGTACTTGAACTCCGGGATCTTGCCGAAGGGGTCCAGTGCCGCATTGGTCAGCTTGTTGATCGCCGCCTCGTAA > AM260480/1930363‑1930456 GCGGGGCGGTGTTCGTGCCGTTCTGCTATTACGAGGCGGCGATCAACAAGCTGACCAATGCGGCACTGGACCCCTTCGGCAAGATCCCGGAGTTCAAGTACTGCGCGGTGAAGATGGCACTGGGCGGCGCGCCG < 2:465844/134‑1 TTACGAGGCGGCGATCAACAAGCTGACCAATGCGGCACTGGACCCCTTCGGCAAGATCCCGGAGTTCAAGTACTGCGCGGTGAAGATGGCACTGGGCGGCGCGCCGCCCAGTGCCATCTTCACCGCGCAGTA < 2:146492/132‑1 TCAACAAGCTGACCAATGCGGCACTGGACCCCTTCGGCAAGATCCCGGAGTTCAAGTACTGCGCGGTGAAGATGGCACTGGGCGGCGCGCCGCCCAGTGCCATCTTC < 2:970582/107‑1 ACCAATGCGGCACTGGACCCCTTCGGCAAGATCCCGGAGTTCAAGTACTGCGCGGTGAAGATGGCACTGGGCGGCGCGCCGCCCAGTGCCATCTTCACCGCGCAGTACTTGAACTCCGGGATCTTGCCGAAGG < 2:633736/133‑1 ATGCGGCACTGGACCCCTTCGGCAAGATCCCGGAGTTCAAGTACTGCGCGGTGAAGATGGCACTGGGCGGCGCGCCGCCCAGTGCCATCTTCACCGCGCAGTACTTGAACTCCGGGATCTTGCCGAAGGGGTCC < 2:555541/134‑1 CGGAGTTCAAGTACTGCGCGGTGAAGATGGCACTGGGCGGCGCGCCGCCCAGTGCCATCTTCACCGCGCAGTACTTGAACTCCGGGATCTTGCCGAAGGGGTCCAGTGCCGCATTGGTCAGCTTGTTGATCGCC > 1:1077477/1‑134 CGGAGTTCAAGTACTGCGCGGTGAAGATGGCACTGGGCGGCGCGCCGCCCAGTGCCATCTTCACCGCGCAGTACTTGAACTCCGGGATCTTGCCGAAGGGGTCCAGTGCCGCATTGGTCAGCTTGTTGATCGCC < 2:1077477/134‑1 AGTACTGCGCGGTGAAGATGGCACTGGGCGGCGCGCCGCCCAGTGCCATCTTCACCGCGCAGTACTTGAACTCCGGGATCTTGCCGAAGGGGTCCAGTGCCGCATTGGTCAGCTTGTTGATCGCCGCCTCGTAA > 1:1057738/1‑134 GAAGATGGCACTGGGCGGCGCGCCGCCCAGTGCCATCTTCACCGCGCAGTACTTGAACTCCGGGATCTTGCCGAAGGGGTCCAGTGCCGCATTGGTCAGCTTGTTGA < 1:970582/107‑1 GCGGGGCGGTGTTCGTGCCGTTCTGCTATTACGAGGCGGCGATCAACAAGCTGACCAATGCGGCACTGGACCCCTTCGGCAAGATCCCGGAGTTCAAGTACTGCGCGGTGAAGATGGCACTGGGCGGCGCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/1930484‑1930349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcgcgccgccCAGTGCCATCTTCACCGCGCAGTACTTGAACTCCGGGATCTTGCCGAAGGGGTCCAGTGCCGCATTGGTCAGCTTGTTGATCGCCGCCTCGTAA > AM260480/1930363‑1930456 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |