New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	= 1885521	22 (0.750)	8 (0.290)	7/198	1.5	31.2%	coding (74/1026 nt)	h16_B1674	hypothetical membrane spanning protein
	?	AM260480	= 1885547	15 (0.550)					coding (100/1026 nt)	h16_B1674	hypothetical membrane spanning protein

CGATGATGCCGTGCCATCCAGAATCCATTGGAGGTGCAGGTCGTGACGCAAGCAGTCTCTTCTCCTTCCCCGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGCCCCGGCAAGTCCGGCGCGGTGGAGCGGGCCTTGCAGGGCTGGCAGCGGTTGCGCTGGCTGGCGGGCAGCGTGGTCAGGCCCGGCGCGACAGCGCGGGCGCTGGAGCACATCTGGTT  >  AM260480/1885406‑1885653                                                                                                                    |                                                                                                                                     cGATGATGCCGTGCCATCCAGAATCCATTGGAGGTGCAGGTCGTGACGCAAGCAGTCTCTTCTCCTTCCCCGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGccc                                                                                                                    <  2:317793/134‑1 (MQ=255)         ccGTGCCATCCAGAATCCATTGGAGGTGCAGGTCGTGACGCAAGCAGTCTCTTCTCCTTCCCCGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGCCCCGGCAAg                                                                                                             <  2:784636/133‑1 (MQ=255)                       aTCCATTGGAGGTGCAGGTCGTGACGCAAGCAGTCTCTTCTCCTTCCCCGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGCCCCGGCAAGTCCGGCGCGGTGGAg                                                                                              <  2:602350/134‑1 (MQ=255)                                      aGGTCGTGACGCAAGCAGTCTCTTCTCCTTCCCCGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATgcgc                                                                                                                              <  2:206997/87‑1 (MQ=255)                                      aGGTCGTGACGCAAGCAGTCTCTTCTCCTTCCCCGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATgcgc                                                                                                                              >  1:206997/1‑87 (MQ=255)                                        gTCGTGACGCAAGCAGTCTCTTCTCCTTCCCCGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGccc                                                                                                                    >  1:365308/1‑95 (MQ=255)                                        gTCGTGACGCAAGCAGTCTCTTCTCCTTCCCCGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGccc                                                                                                                    <  2:365308/95‑1 (MQ=255)                                        gTCGTGACGCAAGCAGTCTCTTCTCCTTCCCCGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGCCCCGGCAAGTccggcgcgcgcgggcaagggc                                                                                       <  1:336332‑M2/124‑22 (MQ=255)                                        gTCGTGACGCAAGCAGTCTCTTCTCCTTCCCCGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGCCCCGGCAAGTccggcgcgcgcgggcaagggc                                                                                       >  2:336332‑M2/1‑103 (MQ=255)                                        gTCGTGACGCAAGCAGTCTCTTCTCCTTCCCCGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGCCCCGGCAAGTCCGGCGCGGTGGAGCGGGCCTTGCAGGGCTg                                                                             >  1:797914/1‑134 (MQ=255)                                                gCAAGCAGTCTCTTCTCCTTCCCCGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGCCCCGGCAAGTCCGGCGCGGTGGAGCGGGCCTTGCAGGGCTGGCAGCGGt                                                                     >  1:813307/1‑134 (MQ=255)                                                gCAAGCAGTCTCTTCTCCTTCCCCGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGCCCCGGCAAGTCCGGCGCGGTGGAGCGGGCCTTGCAGGGCTGGCAGCGGt                                                                     >  1:916724/1‑134 (MQ=255)                                                  aaGCAGTCTCTTCTCCTTCCCCGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGCCCCGGCAAGTCCGGCGCGGTGGAGCGGGCCTTGCAGGGCTGGCAGCGGTTg                                                                   <  2:813307/134‑1 (MQ=255)                                                  aaGCAGTCTCTTCTCCTTCCCCGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGCCCCGGCAAGTCCGGCGCGGTGGAGCGGGCCTTGCAGGGCTGGCAGCGGTTg                                                                   >  2:929867/1‑134 (MQ=255)                                                        tctcTTCTCCTTCCCCGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGCCCCGGCAAGTCCGGCGCGGTGGAGCGGGCCTTGCAGGGCTGGCAGCGGTTGCgctgg                                                             >  1:589242/1‑134 (MQ=255)                                                                 cTTCCCCGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGCCCCGGCAAGTCCGGCGCGGTGGAGCGGGCCTTGCAGGGCTGGCAGCGGTTGCGCTGGCTGGCGGGc                                                    <  2:297830/134‑1 (MQ=255)                                                                      ccGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGc                                                                                                                                     <  2:833893/48‑1 (MQ=255)                                                                      ccGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGc                                                                                                                                     >  1:833893/1‑48 (MQ=255)                                                                      ccGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGacttgccggggcgcagcggcgcatcgccggcgcgcgc                                                                                                 >  2:154774‑M1/1‑47 (MQ=255)                                                                      ccGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGacttgccggggcgcagcggcgcatcgccggcgcgcgc                                                                                                 <  1:154774‑M1/84‑38 (MQ=255)                                                                        ggTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGCCCCGGCAAGTCCGGCGCGGTGGAGCGGGCCTTGCAGGGCTGGCAGCGGTTGCGCTGGCTGGCGGGCAGCGTgg                                             >  1:825103/1‑134 (MQ=255)                                                                             ccTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGacttgccggggcgcagcggcgcatcgccggcgcgcgcgggcaagggcgcggcggtgcgc                                                                           <  2:1020244‑M1/99‑60 (MQ=255)                                                                             ccTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGacttgccggggcgcagcggcgcatccccggcgcgcgcgggcaagggcgcggcggtgcgc                                                                           >  1:1020244‑M1/1‑40 (MQ=255)                                                                                    gcgCACCGCCGCGCCCTTGCCCGCGCGCGCCGGGGATGCGCCGCTGCGCCCCGGCAAGTccggcgcgcgcgggcaagggcgcggcggtgcgggatgagg                                                                    >  1:1020244‑M2/2‑59 (MQ=255)                                                                                    gcgCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGCCCCGGCAAGTccggcgcgcgcgggcaagggcgcggcggtgcgggatgagg                                                                    <  2:1020244‑M2/98‑41 (MQ=255)                                                                                         ccgccgCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGCCCCGGCAAGTCCGGCGCGGTGGAGCGGGCCTTGCAGGGCTGGCAGCGGTTGCGCTGGCTGGCGGGCAGCGTGGTCAGGCCCGGCGCGACa                            <  2:589242/134‑1 (MQ=255)                                                                                         ccgccgCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGCCCCGGCAAGTCCGGCGCGGTGGAGCGGGCCTTGCAGGGCTGGCAGCGGTTGCGCTGGCTGGCGGGCAGCGTGGTCAGGCCCGGCGCGACa                            <  2:805826/134‑1 (MQ=255)                                                                                              gcgcCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGCCCCGGCAAGTCCGGCGCGGTGGAGCGGGCCTTGCAGGGCTGGCAGCGGTTGCGCTGGCTGGCGGGCAGCGTGGTCAGGCCCGGCGCGACAGcgcg                       <  2:295380/134‑1 (MQ=255)                                                                                                gcCCTTGCCCGCGCGCGCCGGacttgccggggcgcagcggcgcatcgccggcgcgcgcgggcaagggcgcggcggtgcgggatgaggaaaccggggaaggagaagagactgcttgcgtcacgac                               <  1:336332‑M1/124‑104 (MQ=255)                                                                                                gcCCTTGCCCGCGCGCGCCGGacttgccggggcgcagcggcgcatcgccggcgcgcgcgggcaagggcgcggcggtgcgggatgaggaaaccggggaaggagaagagactgcttgcgtcacgac                               >  2:336332‑M1/1‑21 (MQ=255)                                                                                                        ccGCGCGCGCCGGacttgccggggcgcagcggcgcatcgc                                                                                                           >  1:669329‑M1/1‑13 (MQ=255)                                                                                                        ccGCGCGCGCCGGacttgccggggcgcagcggcgcatcgc                                                                                                           <  2:669329‑M1/40‑28 (MQ=255)                                                                                                          gcgcgcgcCGGCGATGCGCCGCTGCGCCCCGGCAAGTccggcgcgcgcgggcaagggcgcggcggtgcgggatgaggaaaccgg                                                             <  1:154774‑M2/84‑48 (MQ=255)                                                                                                          gcgcgcgcCGGCGATGCGCCGCTGCGCCCCGGCAAGTccggcgcgcgcgggcaagggcgcggcggtgcgggatgaggaaaccgg                                                             >  2:154774‑M2/1‑37 (MQ=255)                                                                                                               cgcCGGCGATGCGCCGCTGCGCCCCGGCAAGTCCGGCGCGGTGGAGCGGGCCTTGCAGGGCTGGCAGCGGTTGCGCTGGCTGGCGGGCAGCGTGGTCAGGCCCGGCGCGACAGCGCGGGCGCTGGAGCACATCt      >  2:827556/1‑134 (MQ=255)                                                                                                                    gCGATGCGCCGCTGCGCCCCGGCAAGTccggcgcgcgcgg                                                                                               >  1:669329‑M2/1‑27 (MQ=255)                                                                                                                    gCGATGCGCCGCTGCGCCCCGGCAAGTccggcgcgcgcgg                                                                                               <  2:669329‑M2/40‑14 (MQ=255)                                                                                                                    gCGATGCGCCGCTGCGCCCCGGCAAGTCCGGCGCGGTGGAGCGGGCCTTGCAGGGCTGGCAGCGGTTGCGCTGGCTGGCGGGCAGCGTGGTCAGGCCCGGCGCGACAGCGCGGGCGCTGGAGCACATCTGGtt  >  1:817550/1‑133 (MQ=255)                                                                                                                    |                                                                                                                                     CGATGATGCCGTGCCATCCAGAATCCATTGGAGGTGCAGGTCGTGACGCAAGCAGTCTCTTCTCCTTCCCCGGTTTCCTCATCCCGCACCGCCGCGCCCTTGCCCGCGCGCGCCGGCGATGCGCCGCTGCGCCCCGGCAAGTCCGGCGCGGTGGAGCGGGCCTTGCAGGGCTGGCAGCGGTTGCGCTGGCTGGCGGGCAGCGTGGTCAGGCCCGGCGCGACAGCGCGGGCGCTGGAGCACATCTGGTT  >  AM260480/1885406‑1885653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.