New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	= 2007887	17 (0.580)	6 (0.210) +GC	4/210	2.3	20.6%	coding (105/918 nt)	h16_B1766	transcriptional regulator, LysR‑family
	?	AM260480	2007935 =	30 (1.020)					coding (57/918 nt)	h16_B1766	transcriptional regulator, LysR‑family

CGCGCGCGACATCCTGCGCAAGCCGGGCGGCTTCTTCGGTGAGCAATTCGCCGGCGCGCGTCAGCTGCAGGCGGTAGCCGCGGCGGTCGAACAAGAGTGCATCAAAGCGCTGCTCCAGCTGCCGCGCGGCGTGCGACACCGTGGACGGCGCCTTGCCCAGCCTGGCCGCCGCGCGCGACAGGCTGCCGGCCTCCCGGATGGCCTCCAGCAGGGCCAATTCGTCCTCCGACAACATGTGCA  >  AM260480/2007757‑2007996                                                                                                                                   |                                                                                                              cgcgcgcgACATCCTGCGCAAGCCGGGCGGCTTCTTCGGTGAGCAATTCGCCGGCGCGCGTCAGCTGCAGGCGGTAGCCGCGGCGGTCGAACAAGAGTGCATCAAAGCGCTGCTCCAGCTGCCGCGCGGCGTGc                                                                                                            <  2:467149/134‑1 (MQ=255)        gACATCCTGCGCAAGCCGGGCGGCTTCTTCGGTGAGCAATTCGCCGGCGCGCGTCAGCTGCAGGCGGTAGCCGCGGCGGTCGAACAAGAGTGCATCAAAGCGCTGCTCCAGCTGCCGCgcggcg                                                                                                               <  1:1055303/124‑1 (MQ=255)        gACATCCTGCGCAAGCCGGGCGGCTTCTTCGGTGAGCAATTCGCCGGCGCGCGTCAGCTGCAGGCGGTAGCCGCGGCGGTCGAACAAGAGTGCATCAAAGCGCTGCTCCAGCTGCCGCgcggcg                                                                                                               >  2:1055303/1‑124 (MQ=255)                      gCCGGGCGGCTTCTTCGGTGAGCAATTCGCCGGCGCGCGTCAGCTGCAGGCGGTAGCCGCGGCGGTCGAACAAGAGTGCATCAAAGCGCTGCTCCAGCTGCCGCGCGGCGgccaggctgccggcctcccggatg                                                                                       >  1:308971‑M1/1‑110 (MQ=255)                      gCCGGGCGGCTTATTCGGTGAGCAATTCGCCGGCGCGCGTCAGCTGCAGGCGGTAGCCGCGGCGGTCGAACAAGAGTGCATCAAAGCGCTGCTCCAGCTGCCGCGCGGCGgccaggctgccggcctcccggatg                                                                                       >  1:971555‑M1/1‑110 (MQ=255)                          ggcggcTTCTTCGGTGAGCAATTCGCCGGCGCGCGTCAGCTGCAGGCGGTAGCCGCGGCGGTCGAACAAGAGTGCATCAAAGCGCTGCTCCAGCTGCCGCGCGGCGTGCGACACCGTGGACGGCGcc                                                                                          <  1:807292/127‑1 (MQ=255)                          ggcggcTTCTTCGGTGAGCAATTCGCCGGCGCGCGTCAGCTGCAGGCGGTAGCCGCGGCGGTCGAACAAGAGTGCATCAAAGCGCTGCTCCAGCTGCCGCGCGGCGTCCGACACCGTGGACGGCGcc                                                                                          >  2:807292/1‑127 (MQ=255)                                      ggTGAGCAATTCGCCGGCGCGCGTCAGCTGCAGGCGGTAGCCGCGGCGGTCGAACAAGAGTGCATCAAAGCGCTGCTCCAGCTGCCGCGCGGCGTGCGACACCGTGGACGGCGCCTTGCCCAGCCTGGccgccg                                                                       <  2:690657/134‑1 (MQ=255)                                        tGAGCAATTCGCCGGCGCGCGTCAGCTGCAGGCGGTAGCCGCGGCGGTCGAACAAGAGTGCATCAAAGCGCTGCTCCAGCTGCCGCGCGGCGTGCGACACCGTGGACGGCGCCTTGCCCAGCCTGGCCGCcgcg                                                                     <  2:211675/134‑1 (MQ=255)                                                           cgTCAGCTGCAGGCGGTAGCCGCGGCGGTCGAACAAGAGTGCATCAAAGCGCTGCTCCAGCTGCCGCGCGGCGgccaggctgccggcctcccggatggcctccagcagggccaattcgtcctccgacaacatgt                                                  <  2:971555‑M1/134‑62 (MQ=255)                                                           cgTCAGCTGCAGGCGGTAGCCGCGGCGGTCGAACAAGAGTGCATCAAAGCGCTGCTCCAGCTGCCGCGCGGCGgccaggctgccggcctcccggatggcctccagcagggccaattcgtcctccgacaacatgt                                                  <  2:308971‑M1/134‑62 (MQ=255)                                                               aGCTGCAGGCGGTAGCCGCGGCGGTCGAACAAGAGTGCATCAAAGCGCTGCTCCAGCTGCCGCGCGGCGTGCGACACCGTGGACGGCGCCTTGCCCAGCCTGGCCGCCGCGCGCGACAGGCTGCCGGCCTCCCg                                              <  2:239690/134‑1 (MQ=255)                                                                        cGGTAGCCGCGGCGGTCGAACAAGAGTGCATCAAAGCGCTGCTCCAGCTGCCGCGCGGCGTGCGACACCGTGGACGGCGCCTTGCCCAGCCTGGCCGCCGCGCGCGACAGGCt                                                          >  1:305863/1‑113 (MQ=255)                                                                        cGGTAGCCGCGGCGGTCGAACAAGAGTGCATCAAAGCGCTGCTCCAGCTGCCGCGCGGCGTGCGACACCGTGGACGGCGCCTTGCCCAGCCTGGCCGCCGCGCGCGACAGGCt                                                          <  2:305863/113‑1 (MQ=255)                                                                                                    cATCAAAGCGCTGCTCCAGCTGCCGCGCGGCGgccaggctgccggcctcccggatggcctccagcagggccaattcgtcctccgacaacatgtgcaactccttcgaacgtgttcgtcg                         <  2:999329‑M1/118‑87 (MQ=255)                                                                                                    cATCAAAGCGCTGCTCCAGCTGCCGCGCGGCGgccaggctgccggcctcccggatggcctccagcagggccaattcgtcctccgacaacatgtgcaactccttcgaacgtgttcgtcg                         >  1:999329‑M1/1‑32 (MQ=255)                                                                                                    cATCAAAGCGCTGCTCCAGCTGCCGCGCGGCGTGCGACACCGTGGACGGCGCCTTGCCCAGCCTGGCCGCCGCGCGCGACAGGCTGCCGGCCTcc                                                <  2:438024/95‑1 (MQ=255)                                                                                                    cATCAAAGCGCTGCTCCAGCTGCCGCGCGGCGTGCGACACCGTGGACGGCGCCTTGCCCAGCCTGGCCGCCGCGCGCGACAGGCTGCCGGCCTcc                                                >  1:438024/1‑95 (MQ=255)                                                                                                     aTCAAAGCGCTGCTCCAGCTGCCGCGCGGCGTGCGACACCGTGGACGGCGCCTTGCCCAGCCTGGCCGCCGCGCGCGACAGGCTgggca                                                     <  1:72114/89‑5 (MQ=255)                                                                                                     aTCAAAGCGCTGCTCCAGCTGCCGCGCGGCGTGCGACACCGTGGACGGCGCCTTGCCCAGCCTGGCCGCCGCGCGCGACAGGCTgggca                                                     >  2:72114/1‑85 (MQ=255)                                                                                                      tCAAAGCGCTGCTCCAGCTGCCGCGCGGCGTGCGACACCGTGGACGGCGCCTTGCCCAGCCTGGCCGCCGCGCGCGACAGGCTGCCGGCCTCCCGGATGGCCTCCAGCAGGGCCAATTCGTCCTCCGACAACAt       >  2:145012/1‑134 (MQ=255)                                                                                                                  tCCAGCTGCCGCGCGGCGTGCGACACCGTGGACGGCGCCTTGCCCAGCCTGGCCGCCGCGCGCGACAGGCTGCCGGCCTCCCGGATGGCCTCCAGCAGGGCCAATTCGTCCTCCGACAACATGTGCa  <  2:293842/127‑1 (MQ=255)                                                                                                                  tCCAGCTGCCGCGCGGCGTGCGACACCGTGGACGGCGCCTTGCCCAGCCTGGCCGCCGCGCGCGACAGGCTGCCGGCCTCCCGGATGGCCTCCAGCAGGGCCAATTCGTCCTCCGACAACATGTGCa  <  2:532622/127‑1 (MQ=255)                                                                                                                  tCCAGCTGCCGCGCGGCGTGCGACACCGTGGACGGCGCCTTGCCCAGCCTGGCCGCCGCGCGCGACAGGCTGCCGGCCTCCCGGATGGCCTCCAGCAGGGCCAATTCGTCCTCCGACAACATGTGCa  >  1:532622/1‑127 (MQ=255)                                                                                                                  tCCAGCTGCCGCGCGGCGTGCGACACCGTGGACGGCGCCTTGCCCAGCCTGGCCGCCGCGCGCGACAGGCTGCCGGCCTCCCGGATGGCCTCCAGCAGGGCCAATTCGTCCTCCGACAACATGTGCa  >  1:293842/1‑127 (MQ=255)                                                                                                                                   |                                                                                                              CGCGCGCGACATCCTGCGCAAGCCGGGCGGCTTCTTCGGTGAGCAATTCGCCGGCGCGCGTCAGCTGCAGGCGGTAGCCGCGGCGGTCGAACAAGAGTGCATCAAAGCGCTGCTCCAGCTGCCGCGCGGCGTGCGACACCGTGGACGGCGCCTTGCCCAGCCTGGCCGCCGCGCGCGACAGGCTGCCGGCCTCCCGGATGGCCTCCAGCAGGGCCAATTCGTCCTCCGACAACATGTGCA  >  AM260480/2007757‑2007996

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.