Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AY305378	100104	100226	123	3 [1]	[1] 3	kfrA1	putative KfrA protein

GCCGGGCCGAACGGGCCGAGGCCGAAGCGGCGCTGGCGCGCCAGCTGCTGGCAGAATTGCGGGTGACGCCACCCGGGCGGGGGGACGGTGGTGGCGGGCGGCGGCGCAAGGCCGGCAGCCCGGCGCCGACCGAACAGGCGGCGCCACGCGAAAAACTGGACGACAAGCAGGA  >  AY305378/99970‑100141                                                                                                                                      |                                       gcCGGGCCGAACGGGCCGAGGCCGAAGCGGCGCTGGCGCGCCAGCTGCTGGCAGAATTGCGGGTGACGCCACCCGGGCGGGGGGACGGTGGTGGCGGGCGGCGGCGCAAGGCCGGCAGCCCGGCGCCGACCGaa                                        <  2:139893/134‑1 (MQ=255)  ccGGGCCGAACGGGCCGAGGCCGAAGCGGCGCTGGCGCGCCAGCTGCTGGCAGAATTGCGGGTGACGCCACCCGGGCGGGGGGACGGTGGTGGCGGGCGGCGGCGCAAGGCCGGCAGCCCGGCGCCGACCGaa                                        >  1:517091/1‑133 (MQ=255)                                       cgcCAGCTGCTGGCAGAATTGCGGGTGACGCCACCCGGGCGGGGGGACGGTGGTGGCGGGCGGCGGCGCAAGGCCGGCAGCCCGGCGCCGACCGAACAGGCGGCGCCACGCGAAAAACTGGACGACAAGCAgga  <  2:517091/134‑1 (MQ=255)                                                                                                                                      |                                       GCCGGGCCGAACGGGCCGAGGCCGAAGCGGCGCTGGCGCGCCAGCTGCTGGCAGAATTGCGGGTGACGCCACCCGGGCGGGGGGACGGTGGTGGCGGGCGGCGGCGCAAGGCCGGCAGCCCGGCGCCGACCGAACAGGCGGCGCCACGCGAAAAACTGGACGACAAGCAGGA  >  AY305378/99970‑100141

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑