Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AY305378	100104	100226	123	3 [1]	[1] 3	kfrA1	putative KfrA protein

CGGCCGCTTCCAACCCGGATGACGGCAGCGACAGCAGTGACGACAGCAACGACAGCGCCAATGACAGAAATCAATGAGCGGGCCGCGGCGATCCGCTGGATCCAGGCGGAGATGGCCGACTACGGGCTGACCATGGAGGAG  >  AY305378/100177‑100317                                                   |                                                                                           cGGCCGCTTCCAACCCGGATGACGGCAGCGACAGCAGTGACGACAGCAACGACAGCGCCAATGACAGAAATCAATGAGCGGGCCGCGGCGATCCGCTGGATCCAGGCGGAGATGGCCGACTACGGGCTGACCAt         <  2:258202/134‑1 (MQ=255)                                                   gACAGCGCCAATGACAGAAATCAATGAGCGGGCCGCGGCGATCCGCTGGATCCAGGCGGAGATGGCCGACTACGGGCTGACCATGgaggag  >  1:255559/1‑91 (MQ=255)                                                   gACAGCGCCAATGACAGAAATCAATGAGCGGGCCGCGGCGATCCGCTGGATCCAGGCGGAGATGGCCGACTACGGGCTGACCATGgaggag  <  2:255559/91‑1 (MQ=255)                                                   |                                                                                           CGGCCGCTTCCAACCCGGATGACGGCAGCGACAGCAGTGACGACAGCAACGACAGCGCCAATGACAGAAATCAATGAGCGGGCCGCGGCGATCCGCTGGATCCAGGCGGAGATGGCCGACTACGGGCTGACCATGGAGGAG  >  AY305378/100177‑100317

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑