| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | 2274515 = | 19 (0.750) | 6 (0.260) | 5/186 | 1.6 | 31.3% | coding (1610/1770 nt) | h16_A2092 | Lysophospholipase, contains weak SAM‑dependent methyltransferase domain |
| ? | AM260479 | 2274595 = | 9 (0.390) | coding (1530/1770 nt) | h16_A2092 | Lysophospholipase, contains weak SAM‑dependent methyltransferase domain | |||||
CGCGCGGTGCCGCCCGGCGGCTATCTGGTCTACACCGGCCAGCCCTGGCATCCGCAGCTGGAATTCATCGCGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/2274591‑2274515‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcgcgcCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCGGGAAACAGTTCGTACAGGCCGGAAACCACCGCCAGTGTCGGCGCCGGTGCCAGCGCCGCCAGGCTGTCGCCG > AM260479/2274595‑2274703 gGCGCGGTGCCGCCCGGCGGCTATCTGGTCTACACCGGCCAGCCCTGGCATCCGCAGCTGGAATTCATCGCGCGCGCCAGG < 1:829584/80‑1gGCGCGGTGCCGCCCGGCGGCTATCTGGTCTACACCGGCCAGCCCTGGCATCCGCAGCTGGAATTCATCGCGCGCGCCAGG > 2:829584/2‑81CGCGCGGTGCCGCCCGGCGGCTATCTGGTCTACACCGGCCAGCCCTGGCATCCGCAGCTGGAATTCATC > 1:1014338/1‑69CGCGCGGTGCCGCCCGGCGGCTATCTGGTCTACACCGGCCAGCCCTGGCATCCGCAGCTGGAATTCATC < 2:1014338/69‑1 CCCTGGCATCCGCAGCTGGAATTCATCGCGCGCGCCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCGGGAAACAGTTCGTACAGGCCGGAAACCACCGCCAGTGTCGGCGCCGGTGCCAGCGCCGCCAG > 2:180623/1‑134 CCGCAGCTGGAATTCATCGCGCGCGCCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCG < 1:61974/63‑1 CCGCAGCTGGAATTCATCGCGCGCGCCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCG > 2:61974/1‑63 CGCAGCTGGAATTCATCGCGCGCGCCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCGGGAAACAGTTCGTACAGGCCGGAAACCACCGCCAGTGTCGGCGCCGGTGCCAGCGCCGCCAGGCTGTCGCCG < 1:180623/134‑1 CGCGCGGTGCCGCCCGGCGGCTATCTGGTCTACACCGGCCAGCCCTGGCATCCGCAGCTGGAATTCATCGCGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/2274591‑2274515‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcgcgcCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCGGGAAACAGTTCGTACAGGCCGGAAACCACCGCCAGTGTCGGCGCCGGTGCCAGCGCCGCCAGGCTGTCGCCG > AM260479/2274595‑2274703 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |