New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	2274515 =	19 (0.750)	6 (0.260)	5/186	1.6	31.3%	coding (1610/1770 nt)	h16_A2092	Lysophospholipase, contains weak SAM‑dependent methyltransferase domain
	?	AM260479	2274595 =	9 (0.390)					coding (1530/1770 nt)	h16_A2092	Lysophospholipase, contains weak SAM‑dependent methyltransferase domain

CGCGGTGGCTGGTGAGCGCGCGCGCGATGAATTCCAGCTGCGGATGCCAGGGCTGGCCGGTGTAGACCAGATAGCCGCCGGGCGGCACCGCGCGCGCCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCGGGAAACAGTTCGTACAGGCCGGAAACCACCGCCAGTGTCGGCGCCGGTGCCAGCGCCGCCAGGCTGTCGCCG  >  AM260479/2274498‑2274703                                                                                                  |                                                                                                             cgcgGTGGCTGGTGAGCGCGCGCGCGATGAATTCCAGCTGCGGATGCCAGGGCTGGCCGGTGTAGACCAGATAGCCGCCGGGCGGCACCGCGCGCGCCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCg                                                                          <  1:909236/134‑1 (MQ=255)            gTGAGCGCGCGCGCGATGAATTCCAGCTGCGGATGCCAGGGCTGGCCGGTGTAGACCAGATAGCCGCCGGGCGGCACCGCGCGCGCCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCGGGAAACAGTTc                                                               <  1:624457/134‑1 (MQ=255)                     ggcgcggtgccgcccggcggctatctggtctacaccggccagccctggcatccgcagctggaattcatcgcgcgcgcCAgg                                                                                                           <  1:829584‑M2/4‑1 (MQ=255)                     ggcgcggtgccgcccggcggctatctggtctacaccggccagccctggcatccgcagctggaattcatcgcgcgcgcCAgg                                                                                                           >  2:829584‑M2/78‑81 (MQ=255)                           aTGAATTCCAGCTGCGGATGCCAGGGCTGGCCGGTGTAGACCAGATAGCCGCCGGGCGGCACCGCGCGCGCCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCGGGAAACAGTTCGTACAGGCCGGAAac                                                <  1:560836/134‑1 (MQ=255)                                              gCCAGGGCTGGCCGGTGTAGACCAGATAGCCGCCGGGCGGCACCGCGCGCGCCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCGGGAAACAGTTCGTACAGGCCGGAAACCACCGCCAGTGTCGGCGcc                             >  1:329981/1‑134 (MQ=255)                                                            gtgtAGACCAGATAGCCGCCGGGCGGCACCGCGCGCGCCAGGCCCTcgag                                                                                                   >  1:673412/1‑50 (MQ=255)                                                            gtgtAGACCAGATAGCCGCCGGGCGGCACCGCGCGCGCCAGGCCCTcgag                                                                                                   <  2:673412/50‑1 (MQ=255)                                                            gtgtAGACCAGATAGCCGCCGGGCGGCACCGCGCGCGCCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCGGGAAACAGTTCGTACAGGCCGGAAACCACCGCCAGTGTCGGCGCCGGTGCCAGcgccgc               >  1:359614/1‑134 (MQ=255)                                                               ccctggcatccgcagctggaattcatcgcgcgcgcCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCGGGAAACAGTTCGTACAGGCCGGAAACCACCGCCAGTGTCGGCGCCGGTGCCAGCGCCGCCAg            >  2:180623‑M2/36‑134 (MQ=255)                                                                        ccgcagctggaattcatcgcgcgcgcCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCg                                                                          <  1:61974‑M2/37‑1 (MQ=255)                                                                        ccgcagctggaattcatcgcgcgcgcCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCg                                                                          >  2:61974‑M2/27‑63 (MQ=255)                                                                         cgcagctggaattcatcgcgcgcgcCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCGGGAAACAGTTCGTACAGGCCGGAAACCACCGCCAGTGTCGGCGCCGGTGCCAGCGCCGCCAGGCTGTCGCCg  <  1:180623‑M2/109‑1 (MQ=255)                                                                           ccgccgGGCGGCACCGCGCGCGCCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCGGGAAACAGTTCGTACAg                                                         <  1:29370/77‑1 (MQ=255)                                                                           ccgccgGGCGGCACCGCGCGCGCCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCGGGAAACAGTTCGTACAg                                                         >  2:29370/1‑77 (MQ=255)                                                                                                  |                                                                                                             CGCGGTGGCTGGTGAGCGCGCGCGCGATGAATTCCAGCTGCGGATGCCAGGGCTGGCCGGTGTAGACCAGATAGCCGCCGGGCGGCACCGCGCGCGCCAGGCCCTCGAGCGAGCGCCGCACCATCGCGTTGTCGGGAAACAGTTCGTACAGGCCGGAAACCACCGCCAGTGTCGGCGCCGGTGCCAGCGCCGCCAGGCTGTCGCCG  >  AM260479/2274498‑2274703

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.