| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 3025466 | 11 (0.430) | 4 (0.170) | 4/194 | 1.8 | 32.7% | coding (556/579 nt) | h16_A2798 | conserved hypothetical protein |
| ? | AM260479 | = 3025492 | 6 (0.250) | intergenic (+3/+13) | h16_A2798/h16_A2799 | conserved hypothetical protein/Dinucleotide‑utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 | |||||
CGCGGATTATCCGGAGCTGATCTTCTTCGACAACCTTGCACCCGGCGACGCCGAGATCGACGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260479/3025402‑3025466‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcCGCTCAGGCGCTCAGCGCGCGCAGCAGCCCGTCGATCTCGGCGTCGCCGGGTGCAAGGTTGTCGAAGAAGATCAGCTCCGGATAATCCGCGGGCGCCGGCATGAAGCGCCGGGTGCGGTAGGCTTCCCAGT < AM260479/3025492‑3025362 CGCGGATTATCCGGAGCTGATCTTCTTCGACAACCTTGCACCCGGCGACGCCGAGATCGACGGGCCG < 1:611096/67‑1CGCGGATTATCCGGAGCTGATCTTCTTCGACAACCTTGCACCCGGCGACGCCGAGATCGACGGGCCG > 2:611096/1‑67 ACCCGGCGACGCCGAGATCGACGGGCCGCTCAGGCGCT < 1:626104/38‑1 ACCCGGCGACGCCGAGATCGACGGGCCGCTCAGGCGCT > 2:626104/1‑38 GGCCGCTCAGGCGCTCAGCGCGCGCAGCAGCCCGTCGATCTCGGCGTCGCCGGGTGCAAGGTTGTCGAAGAAGATCAGCTCCGGATAATCCGCGGGCGCCGGCATGAAGCGCCGGGTGCGGTAGGCTTCCCAGT < 2:454711/134‑1 GCCGCTCAGGCGCTCAGCGCGCGCAGCAGCCCGTCGATCTCGGCGTCGCCGGGTGCAAGGTTGT > 1:251783/1‑64 GCCGCTCAGGCGCTCAGCGCGCGCAGCAGCCCGTCGATCTCGGCGTCGCCGGGTGCAAGGTTGT < 2:251783/64‑1 GCCGCTCAGGCGCTCAGCGCGCGCAGCAGCCCGTCGATCTCGGCGT > 1:117868/1‑46 GCCGCTCAGGCGCTCAGCGCGCGCAGCAGCCCGTCGATCTCGGCGT < 2:117868/46‑1 CGCGGATTATCCGGAGCTGATCTTCTTCGACAACCTTGCACCCGGCGACGCCGAGATCGACGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260479/3025402‑3025466‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcCGCTCAGGCGCTCAGCGCGCGCAGCAGCCCGTCGATCTCGGCGTCGCCGGGTGCAAGGTTGTCGAAGAAGATCAGCTCCGGATAATCCGCGGGCGCCGGCATGAAGCGCCGGGTGCGGTAGGCTTCCCAGT < AM260479/3025492‑3025362 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |