| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | 3753484 = | 7 (0.280) | 5 (0.220) | 5/186 | 1.6 | 41.0% | coding (254/501 nt) | h16_A3485 | putative flavin reductase |
| ? | AM260479 | 3753521 = | 8 (0.350) | coding (217/501 nt) | h16_A3485 | putative flavin reductase | |||||
GTCGGCTTGACGGTGAACTCGTTTGCCTCGCTGTCGCTGGCGCCGCCGCTGATCCTGTGGAGCCTGGCGCTGCACTCGCCGAATGCGGGCCTGTTCGTGCCCGGCGCGCCTTTCGGCGTCAGCATCCTGCGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/3753620‑3753484‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccggGCACGAACAGGCCCGCATTCGGCGAGTGCAGCGCCAGGCTCCACAGGATCAGCGGCGGCGCCAGCGACAGCGAGGCAAACGAGTTCACCGTCAAGCCGACGGGCCGGCCCTGCGCCCCGCAGGCGCCGATGA > AM260479/3753521‑3753652 GTCGGCTTGACGGTGAACTCGTTTGCCTCGCTGTCGCTGGCGCCGCCGCTGATCCTGTGGAGCCTGGCGCTGCACTCGCCGAATGCGGGCCTGTTCGTGCCCGGCGCGCCTTTCGGCGTCAGCATCCTGCGCGC > 1:821502/1‑134 CTTGACGGTGAACTCGTTTGCCTCGCTGTCGCTGGCGCCGCCGCTGATCCTGTGGAGCCTGGCGCTGCACTCGCCGAATGCGGGCCTGTTCGTGCCCGGCGCGCCTTTCGGCGTCAGCATCCTGCGCGCCGGG > 2:797001/1‑133 GACGGTGAACTCGTTTGCCTCGCTGTCGCTGGCGCCGCCGCTGATCCTGTGGAGCCTGGCGCTGCACTCGCCGAATGCGGGCCTGTTCGTGCCCGGCGCGCCTTTCGGCGTCAGCATCCTGCGCGCCGGGCA < 1:797849/132‑1 GCTGGCGCCGCCGCTGATCCTGTGGAGCCTGGCGCTGCACTCGCCGAATGCGGGCCTGTTCGTGCCCGGCGCGCCTTTCGGCGTCAGCATCCTGCGCGCCGGGCACGAACAGGCCCGCATTCGGCGAGTGCAGC < 1:797001/134‑1 GCTGATCCTGTGGAGCCTGGCGCTGCACTCGCCGAATGCGGGCCTGTTCGTGCCCGGCGCGCCTTTCGGCGTCAGCATCCTGCGCGCCG < 1:206708/89‑1 GCTGATCCTGTGGAGCCTGGCGCTGCACTCGCCGAATGCGGGCCTGTTCGTGCCCGGCGCGCCTTTCGGCGTCAGCATCCTGCGCGCCG > 2:206708/1‑89 TGTTCGTGCCCGGCGCGCCTTTCGGCGTCAGCATCCTG > 1:213049/1‑38 TGTTCGTGCCCGGCGCGCCTTTCGGCGTCAGCATCCTG < 2:213049/38‑1 GCGCGCCTTTCGGCGTCAGCATCCTGCGCGCCGGGCACGAACAGGCCCGCATTCGGCGAGTGCAGCGC < 1:927108/68‑1 GCGCGCCTTTCGGCGTCAGCATCCTGCGCGCCGGGCACGAACAGGCCCGCATTCGGCGAGTGCAGCGC > 2:927108/1‑68 CGGGCACGAACAGGCCCGCATTCGGCGAGTGCAGCGCCAGGCTCCACAGGATCAGCGGCGGCGCCAGCGACAGCGAGGCAAACGAGTTCACCGTCAAGCCGACGGGCCGGCCCTGCGC < 1:439314/118‑1 CGGGCACGAACAGGCCCGCATTCGGCGAGTGCAGCGCCAGGCTCCACAGGATCAGCGGCGGCGCCAGCGACAGCGAGGCAAACGAGTTCACCGTCAAGCCGACGGGCCGGCCCTGCGC > 2:439314/1‑118 GGGCACGAACAGGCCCGCATTCGGCGAGTGCAGCGCCAGGCTCCACAGGATCAGCGGCGGCGCCAGCGACAGCGAGGCAAACGAGTTCACCGTCAAGCCGACGGGCCGGCCCTGCGCCCCGCAGGCGCCGATGA > 1:451308/1‑134 GTCGGCTTGACGGTGAACTCGTTTGCCTCGCTGTCGCTGGCGCCGCCGCTGATCCTGTGGAGCCTGGCGCTGCACTCGCCGAATGCGGGCCTGTTCGTGCCCGGCGCGCCTTTCGGCGTCAGCATCCTGCGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/3753620‑3753484‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccggGCACGAACAGGCCCGCATTCGGCGAGTGCAGCGCCAGGCTCCACAGGATCAGCGGCGGCGCCAGCGACAGCGAGGCAAACGAGTTCACCGTCAAGCCGACGGGCCGGCCCTGCGCCCCGCAGGCGCCGATGA > AM260479/3753521‑3753652 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |