| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | 1752148 = | 6 (0.270) | 4 (0.200) | 4/188 | 1.6 | 45.6% | coding (228/2271 nt) | glgB | 1,4‑Alpha‑glucan branching enzyme |
| ? | AM260480 | 1752165 = | 4 (0.200) | coding (245/2271 nt) | glgB | 1,4‑Alpha‑glucan branching enzyme | |||||
GGTCGGCGCCGCACTGCCCGCTGCCGTCGGACCATTGCACGCGCAGCCGGTAATCGGGCGCACCGCCCTTGTATTCGCGCGGCAGCCGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/1752239‑1752148‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcgcgAATACAAGGGCGGTGCGCCCGATTACC > AM260480/1752165‑1752191 GGTCGGCGCCGCACTGCCCGCTGCCGTCGGACCATTGCACGCGCAGCCGGTAATCGGGCGCACCGCCCTTGTATTCGCGCGGCAGCCGCGCGAATACAAGGGCGGTGCGCCCGATTACC < 1:559791/119‑1GGTCGGCGCCGCACTGCCCGCTGCCGTCGGACCATTGCACGCGCAGCCGGTAATCGGGCGCACCGCCCTTGTATTCGCGCGGCAGCCGCGCGAATACAAGGGCGGTGCGCCCGATTACC > 2:559791/1‑119 GCCGCACTGCCCGCTGCCGTCGGACCATTGCACGCGCAGCCGGTAATCGGGCGCACCGCCCTTGTATTCGCGCGGCAGCCGCGCGAATA < 1:153517/89‑1 GCCGCACTGCCCGCTGCCGTCGGACCATTGCACGCGCAGCCGGTAATCGGGCGCACCGCCCTTGTATTCGCGCGGCAGCCGCGCGAATA > 2:153517/1‑89 GGTCGGCGCCGCACTGCCCGCTGCCGTCGGACCATTGCACGCGCAGCCGGTAATCGGGCGCACCGCCCTTGTATTCGCGCGGCAGCCGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/1752239‑1752148‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcgcgAATACAAGGGCGGTGCGCCCGATTACC > AM260480/1752165‑1752191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |