New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	= 2714076	9 (0.410)	4 (0.200)	4/186	1.6	31.7%	coding (282/756 nt)	h16_B2404	hypothetical membrane spanning protein
	?	AM260480	= 2714093	9 (0.450)					coding (265/756 nt)	h16_B2404	hypothetical membrane spanning protein

TCGCGTGCGTCGTCATGCCGGCCGGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AM260480/2714048‑2714076 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcaccTGGCTGTGCGCGGCATGGGTGCCGGCCGGCATGACGACGCACGCGACCTCGGCCTTGGGTGTGGCGCTGGTGCTGTA  <  AM260480/2714093‑2714017                                                                                                            TCGCGTGCGTCGTCATGCCGGCCGGCACCTGGCTGTGCGCGGCATGGGTGCCGGC                                                     <  1:864374/55‑1 TCGCGTGCGTCGTCATGCCGGCCGGCACCTGGCTGTGCGCGGCATGGGTGCCGGC                                                     >  2:864374/1‑55   GCGTGCGTCGTCATGCCGGCCGGCACCTGGCTGTGCGCGGCATGGGTGCCGGCCGGCATGACGACGCACGCGACCTCGGCCTTGGGTGTGGCGCTGGTGCTGTA  >  1:498473/1‑104   GCGTGCGTCGTCATGCCGGCCGGCACCTGGCTGTGCGCGGCATGGGTGCCGGCCGGCATGACGACGCACGCGACCTCGGCCTTGGGTGTGGCGCTGGTGCTGTA  <  2:498473/104‑1                                                                                                            TCGCGTGCGTCGTCATGCCGGCCGGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AM260480/2714048‑2714076 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcaccTGGCTGTGCGCGGCATGGGTGCCGGCCGGCATGACGACGCACGCGACCTCGGCCTTGGGTGTGGCGCTGGTGCTGTA  <  AM260480/2714093‑2714017

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.