| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | = 2714076 | 9 (0.410) | 4 (0.200) | 4/186 | 1.6 | 31.7% | coding (282/756 nt) | h16_B2404 | hypothetical membrane spanning protein |
| ? | AM260480 | = 2714093 | 9 (0.450) | coding (265/756 nt) | h16_B2404 | hypothetical membrane spanning protein | |||||
TACAGCACCAGCGCCACACCCAAGGCCGAGGTCGCGTGCGTCGTCATGCCGGCCGGCACCCATGCCGCGCACAGCCAGGTGCCGGCGCAGATCGCCACCAGCATCGGCCACAGCCGTAGCATCAGCTGCCCGAAGCGCGGCCCGCCGAACAGCTGCACCACGTTGGTCACCATCGACGG > AM260480/2714017‑2714195 | tACAGCACCAGCGCCACACCCAAGGCCGAGGTCGCGTGCGTCGTCATGCCGGCCGGCACCCATGCCGCGCACAGCCAggtgccggccggcatgacgacgcacgc > 1:498473‑M2/1‑77 (MQ=255)tACAGCACCAGCGCCACACCCAAGGCCGAGGTCGCGTGCGTCGTCATGCCGGCCGGCACCCATGCCGCGCACAGCCAggtgccggccggcatgacgacgcacgc < 2:498473‑M2/104‑28 (MQ=255)tACAGCACCAGCGCCACACCCAAGGCCGAGGTCGCGTGCGTCGTCATGCCGGCCGGCACCCATGCCGCGCACAGCCAGGTGCCGGCGCAGATCGCCACCAGCATCGGCCACAGCCGTAGCATCAGCTGCCCg > 1:994632/1‑132 (MQ=255) cgcCACACCCAAGGCCGAGGTCGCGTGCGTCGTCATGCCGGCCGGCACCCATGCCGCGCACAGCCAGGTGCCGGCGCAGATCGCCACCAGCATCGGCCACAGCCGTAGCATCAGCTGCCCGAAGCGCGGCccgc < 2:994632/134‑1 (MQ=255) cacaCCCAAGGCCGAGGTCGCGTGCGTCGTCATGCCGGCCGGCACCCATGCCGCGCACAGCCAGGTGCCGGCGCAGATCGCCACCAGCATCGGCCACAGCCGTAGCATCAGCTGCCCGAAGCGCGGCccgccg > 1:623682/1‑133 (MQ=255) cATGCCGGCCGGCACCCATGCCGCGCACAGCCAGGTGCCGGCGCAGATCGCCACCAGCATCg < 1:110933/62‑1 (MQ=255) cATGCCGGCCGGCACCCATGCCGCGCACAGCCAGGTGCCGGCGCAGATCGCCACCAGCATCg > 2:110933/1‑62 (MQ=255) gccggcACCCATGCCGCGCACAGCCAggtgccggccggcatgacgacgcacgcga < 1:864374‑M2/55‑30 (MQ=255) gccggcACCCATGCCGCGCACAGCCAggtgccggccggcatgacgacgcacgcga > 2:864374‑M2/1‑26 (MQ=255) gcgcACAGCCAGGTGCCGGCGCAGATCGCCACCAGCATCGGCCACAGCCGTAGCATCAGCTGCCCGAAGCGCGGCCCGCCGAACAGCTGCACCACGTTGGTCACCATCGACgg < 1:130049/113‑1 (MQ=255) gcgcACAGCCAGGTGCCGGCGCAGATCGCCACCAGCATCGGCCACAGCCGTAGCATCAGCTGCCCGAAGCGCGGCCCGCCGAACAGCTGCACCACGTTGGTCACCATCGACgg > 2:130049/1‑113 (MQ=255) acaGCCAGGTGCCGGCGCAGATCGCCACCAGCATCGGCCACAGCCGTAGCATCAGCTGCCCGAAGCGCGGCCCGCCGAACAGCTGcac < 1:39686/88‑1 (MQ=255) acaGCCAGGTGCCGGCGCAGATCGCCACCAGCATCGGCCACAGCCGTAGCATCAGCTGCCCGAAGCGCGGCCCGCCGAACAGCTGcac > 2:39686/1‑88 (MQ=255) | TACAGCACCAGCGCCACACCCAAGGCCGAGGTCGCGTGCGTCGTCATGCCGGCCGGCACCCATGCCGCGCACAGCCAGGTGCCGGCGCAGATCGCCACCAGCATCGGCCACAGCCGTAGCATCAGCTGCCCGAAGCGCGGCCCGCCGAACAGCTGCACCACGTTGGTCACCATCGACGG > AM260480/2714017‑2714195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |