| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | 2549508 = | 15 (0.590) | 4 (0.170) | 4/194 | 1.8 | 22.1% | coding (756/957 nt) | tal | Transaldolase |
| ? | AM260479 | 2549558 = | 14 (0.580) | coding (806/957 nt) | tal | Transaldolase | |||||
ACGACTACTACAAGAAGTTCGGCTACCCGACCGAGGTGATGGGCGCCAGCTTCCGCAGCACCACGCAGATCCTGTCGCTGGCCGGCTGCGACCTGCTCACCATCAGCCCCGAGCTGCTCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGTGGACCAGGCCCAGGCCGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGAGGATGCGATGGCGACCGA > AM260479/2549375‑2549630 | atcagcttctccagcttgaccgcatccgccgcaaacaggcggatgccttcggccagcttctcggtcgccatcgcatcctcattcaactgccagcggaaggccggctcgtcggccgcgatgcgggcgatattggc > 2:304024‑M1/134‑134 (MQ=255) cAAGAAGTTCGGCTACCCGACCGAGGTGATGGGCGCCAGCTTCCGCAGCACCACGCAGATCCTGTCGCTGGCCGGCTGCGACCTGCTCACCATCAGCCCCGAGCTGCTCGAGCAGCTCGCGGCCGGCCAGGGcc > 1:129623/1‑134 (MQ=255) aagaagTTCGGCTACCCGACCGAGGTGATGGGCGCCAGCTTCCGCAGCACCACGCAGATCCTGTCGCTGGCCGGCTGCGACCTGCTCACCATCAGCCCCGAGCTGCTCGAGCAGCTCGCGGCCGGCCAGGGccc > 1:959439/1‑134 (MQ=255) catccgccgcaaacaggcggatgccttcggccagcttctcggtcgccatcgcatcctcattcaactgccagcggaaggccggctcgtcggccgcgatgcgggcgatattggCGGCCAGGGcc < 1:902080‑M1/11‑1 (MQ=255) catccgccgcaaacaggcggatgccttcggccagcttctcggtcgccatcgcatcctcattcaactgccagcggaaggccggctcgtcggccgcgatgcgggcgatattggCGGCCAGGGcc > 2:902080‑M1/112‑122 (MQ=255) ggCGCCAGCTTCCGCAGCACCACGCAGATCCTGTCGCTGGCCGGCTGCGACCTGCTCACCATCAGCCCCGAGCTGCTCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGTGGAccaggc < 2:959439/134‑1 (MQ=255) ggCGCCAGCTTCCGCAGCACCACGCAGATCCTGTCGCTGGCCGGCTGCGACCTGCTCACCATCAGCCCCGAGCTGCTCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGTGGAccaggc < 2:625884/134‑1 (MQ=255) cAGCTTCCGCAGCACCACGCAGATCCTGTCGCTGGCCGGCTGCGACCTGCTCACCATCAGCCCCGAGCTGCTCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGTGGAccaggcccagg < 1:347672/134‑1 (MQ=255) aactgccagcggaaggccggctcgtcggccgcgatgcgggcgatattggCGGCCAGGGCCCGGTGGCGCACAAGCTGt < 1:890654‑M1/29‑1 (MQ=255) aactgccagcggaaggccggctcgtcggccgcgatgcgggcgatattggCGGCCAGGGCCCGGTGGCGCACAAGCTGt > 2:890654‑M1/50‑78 (MQ=255) cGACCTGCTCACCATCAGCCCCGAGCTGCTCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGgc > 1:902987/1‑63 (MQ=255) cGACCTGCTCACCATCAGCCCCGAGCTGCTCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGgc < 2:902987/63‑1 (MQ=255) tgctCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGt > 1:649252/1‑52 (MQ=255) tgctCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGt < 2:649252/52‑1 (MQ=255) tgctCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGTGGACCAGGCCCAGGCCGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGAGGATGCGATg > 1:178168/1‑134 (MQ=255) gctCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGTGGAccaggcc < 2:977499/61‑1 (MQ=255) gctCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGTGGAccaggcc > 1:977499/1‑61 (MQ=255) ctCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGTGGACCAGGCCCAGGCCGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTg > 2:691759/1‑110 (MQ=255) ctCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGTGGACCAGGCCCAGGCCGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTg < 1:691759/110‑1 (MQ=255) cagcTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGTGGACCAGGCCCAGGCCGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGAGGATGCGATGGCGACCga < 2:129623/134‑1 (MQ=255) | ACGACTACTACAAGAAGTTCGGCTACCCGACCGAGGTGATGGGCGCCAGCTTCCGCAGCACCACGCAGATCCTGTCGCTGGCCGGCTGCGACCTGCTCACCATCAGCCCCGAGCTGCTCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGTGGACCAGGCCCAGGCCGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGAGGATGCGATGGCGACCGA > AM260479/2549375‑2549630 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |