New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	2549508 =	15 (0.590)	4 (0.170)	4/194	1.8	22.1%	coding (756/957 nt)	tal	Transaldolase
	?	AM260479	2549558 =	14 (0.580)					coding (806/957 nt)	tal	Transaldolase

TGCTCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGTGGACCAGGCCCAGGCCGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGAGGATGCGATGGCGACCGAGAAGCTGGCCGAAGGCATCCGCCTGTTTGCGGCGGATGCGGTCAAGCTGGAGAAGCTGATC  >  AM260479/2549489‑2549691                                                                      |                                                                                                                                      tgctCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGTGGACCAGGCCCAGGCCGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGAGGATGCGATg                                                                       >  1:178168/1‑134 (MQ=255)   ctCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGTGGACCAGGCCCAGGCCGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTg                                                                                             >  2:691759/1‑110 (MQ=255)   ctCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGTGGACCAGGCCCAGGCCGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTg                                                                                             <  1:691759/110‑1 (MQ=255)         cagcTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGTGGACCAGGCCCAGGCCGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGAGGATGCGATGGCGACCga                                                               <  2:129623/134‑1 (MQ=255)                                         caAGCTGTCGGTGGACCAGGCCCAGGCCGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTc                                                                                                  >  1:344485/1‑67 (MQ=255)                                         caAGCTGTCGGTGGACCAGGCCCAGGCCGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTc                                                                                                  <  2:344485/67‑1 (MQ=255)                                         acagcttgtgcgccaccgggccctggccgCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGtt                                                                                       <  1:890654‑M2/49‑1 (MQ=255)                                         acagcttgtgcgccaccgggccctggccgCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGtt                                                                                       >  2:890654‑M2/30‑78 (MQ=255)                                                  ggTGGACCAGGCCCAGGCCGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGAGGATGCGATGGCGACCGAGAAGCTGGCCGAAGGCATCCGCCTGTTTGCGGCGGATGCgg                      <  2:178168/134‑1 (MQ=255)                                                    tGGACCAGGCCCAGGCCGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGa                                                                                 <  1:903647/73‑1 (MQ=255)                                                    tGGACCAGGCCCAGGCCGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGa                                                                                 >  2:903647/1‑73 (MQ=255)                                                          aggcccaggccGCCAATATCGCCCGCATCGCGGCCGACGAGc                                                                                                          >  1:476235/1‑42 (MQ=255)                                                          aggcccaggccGCCAATATCGCCCGCATCGCGGCCGACGAGc                                                                                                          <  2:476235/42‑1 (MQ=255)                                                          aggcccaggccGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGAGGATGCGATGGCGACCGAGAAGCTGGCCGAAGGCATCCGCCTGTTTGCGGCGGATGCGGTCAAGCTg              >  2:602767/1‑134 (MQ=255)                                                           ggccctggccgCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGAGGATGCGATGGCGACCGAGAAGCTGGCCGAAGGCATCCGCCTGTTTGCGGCGGATg                         <  1:902080‑M2/111‑1 (MQ=255)                                                           ggccctggccgCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGAGGATGCGATGGCGACCGAGAAGCTGGCCGAAGGCATCCGCCTGTTTGCGGCGGATg                         >  2:902080‑M2/12‑122 (MQ=255)                                                                aggccGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGAGGATGCGATGGCGACCGAGAAGCTGGCCGAAGGCATCCGCCTGTTTGCGGCGGATGCgg                      >  2:968278/1‑120 (MQ=255)                                                                aggccGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGAGGATGCGATGGCGACCGAGAAGCTGGCCGAAGGCATCCGCCTGTTTGCGGCGGATGCgg                      <  1:968278/120‑1 (MQ=255)                                                                     gCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGAGGATGCGATGGCGACCGAGAAGCTGGCCGAAGGCATCCGCCTGTTTGCGGCGGATGCGGTCAAGCTGGAGAAGCTGAt   >  2:304024‑M2/2‑134 (MQ=255)                                                                      ccAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGAGGATGCGATGGCGACCGAGAAGCTGGCCGAAGGCAt                                             >  2:962424/1‑91 (MQ=255)                                                                      ccAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGAGGATGCGATGGCGACCGAGAAGCTGGCCGAAGGCAt                                             <  1:962424/91‑1 (MQ=255)                                                                      ccAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGAGGATGCGATGGCGACCGAGAAGCTGGCCGAAGGCATCCGCCTGTTTGCGGCGGATGCGGTCAAGCTGGAGAAGCTGATc  >  2:224742/1‑134 (MQ=255)                                                                      |                                                                                                                                      TGCTCGAGCAGCTCGCGGCCGGCCAGGGCCCGGTGGCGCACAAGCTGTCGGTGGACCAGGCCCAGGCCGCCAATATCGCCCGCATCGCGGCCGACGAGCCGGCCTTCCGCTGGCAGTTGAATGAGGATGCGATGGCGACCGAGAAGCTGGCCGAAGGCATCCGCCTGTTTGCGGCGGATGCGGTCAAGCTGGAGAAGCTGATC  >  AM260479/2549489‑2549691

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.