| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 3257320 | 26 (1.030) | 4 (0.200) | 4/164 | 1.6 | 22.3% | coding (1345/1626 nt) | asdA | L‑Aspartate decarboxylase |
| ? | AM260479 | = 3257300 | 7 (0.340) | coding (1325/1626 nt) | asdA | L‑Aspartate decarboxylase | |||||
AGAACGCGATGAAGCGGCTGATCCGCAGCCGCAAGGCCGCGCTGTACCGCGAGATCGGCATCGCGCCGGAAAGCGACGACCCGAATGCCGTGGACTACTACACGCTGCTCGATATCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTCAAATGGGTGATGAACTCGGTCGAGCCGAACGAATTGCTGTTCCAGCTGGCCGATGAGGCAGGCGTGGTGCTGCTGCCGGGCCGCGGCTTC > AM260479/3257198‑3257442 | aGAACGCGATGAAGCGGCTGATCCGCAGCCGCAAGGCCGCGCTGTACCGCGAGATCGGCATCGCGCCGGAAAGCGACGACCCGAATGCCGTGGACTACTACACGCTGCTCGATATCGAGCAGCTGGGCGGCAAg < 2:995176/134‑1 (MQ=255) gAACGCGATGAAGCGGCTGATCCGCAGCCGCAAGGCCGCGCTGTACCGCGAGATCGGCATCGCGCCGGAAAGCGACGACCCGAATGCCGTGGACTACTACACGCTGCTCGATATCGAGCAGCTGGGCGGCAAgg < 1:118880/134‑1 (MQ=255) aGCGGCTGATCCGCAGCCGCAAGGCCGCGCTGTACCGCGAGATCGGCATCGCGCCGGAAAGCGACGACCCGAATGCCGTGGACTACTACACGCTGCTCGATATCGAGCAGCTGGGCGGCAAg > 1:1043674/1‑122 (MQ=255) aGCGGCTGATCCGCAGCCGCAAGGCCGCGCTGTACCGCGAGATCGGCATCGCGCCGGAAAGCGACGACCCGAATGCCGTGGACTACTACACGCTGCTCGATATCGAGCAGCTGGGCGGCAAg < 2:1043674/122‑1 (MQ=255) tACCGCGAGATCGGCATCGCGCCGGAAAGCGACGACCCGAATGCCGTGGACTACTACACGCTGCTCGATATCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTCAAATGGGTGATGAACTCGGTCg < 1:85021/133‑1 (MQ=255) gcgAGATCGGCATCGCGCCGGAAAGCGACGACCCGAATGCCGTGGACTACTACACGCTGCTCGATATCGAGCAGCgtgtagtagtccacggcattcgggtcgtcgc < 1:359842‑M1/106‑32 (MQ=255) gaTCGGCATCGCGCCGGAAAGCGACGACCCGAATGCCGTGGACTACTACACGCTGCTCGATATCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTCAAATGGGTGATGAACTCGGTCGAGCcgaacg < 2:677548/134‑1 (MQ=255) ggCATCGCGCCGGAAAGCGACGACCCGAATGCCGTGGACTACTACACGCTGCTCGATATCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTCAAATGGGTGATGAACTCGGTCGAGCCGAACGAAtt > 1:107212/1‑134 (MQ=255) gCGACGACCCGAATGCCGTGGACTACTACACGCTGCTCGATATCGAGCAGCgtgtagtagtccacggcattcgggtcgtcgctttccggcgcgatgccgatctcgc < 2:359842‑M1/106‑56 (MQ=255) cGCTGCTCGATATCGAGCAGCgtgtagtagtccacggcattcgggtcgtcgctttccggcgcgatgccgatctcgcggtaca > 1:594648‑M1/1‑21 (MQ=255) cGCTGCTCGATATCGAGCAGCgtgtagtagtccacggcattcgggtcgtcgctttccggcgcgatgccgatctcgcggtaca < 2:594648‑M1/82‑62 (MQ=255) ctCGATATCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTCAAATGGGTGATGAACTCGGTCGAGCcgaacga < 2:962922/80‑1 (MQ=255) ctCGATATCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTCAAATGGGTGATGAACTCGGTCGAGCcgaacga > 1:962922/1‑80 (MQ=255) atatCGAGCAGCgtgtagtagtccacggcattcgggtcgtcgctttccggcgcgatgccgatctcgcggtacagcgcggccttgcggctgcggatcagccgcttcatcgcgttcttgtagttgtccggcgtatc > 2:111538‑M1/1‑12 (MQ=255) atatCGAGCAGCgtgtagtagtccacggcattcgggtcgtcgctttccggcgcgatgccgatctcgcggtacagcgcggccttgcggctgcggatcagccgcttcatcgcgttcttgtagttgtccggcgtatc < 2:118880‑M1/134‑123 (MQ=255) atatCGAGCAGCgtgtagtagtccacggcattcgggtcgtcgctttccggcgcgatgccgatctcgcggtacagcgcggccttgcggctgcggatcagccgcttca > 2:153950‑M1/1‑12 (MQ=255) atatCGAGCAGCgtgtagtagtccacggcattcgggtcgtcgctttccggcgcgatgccgat > 2:767636‑M1/1‑12 (MQ=255) atatCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGt < 1:28760/43‑1 (MQ=255) atatCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGt > 2:28760/1‑43 (MQ=255) atatCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTc < 1:18056/44‑1 (MQ=255) atatCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTc > 2:18056/1‑44 (MQ=255) atatCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTCAAATGGGTGATGAACTCGGTCGAGCcga < 1:127087/72‑1 (MQ=255) atatCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTCAAATGGGTGATGAACTCGGTCGAGCcga > 2:127087/1‑72 (MQ=255) atatCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTCAAATGGGTGATGAACTCGGTCGAGCCGAACGAATTGCTGTTCCa < 1:821076/88‑1 (MQ=255) atatCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTCAAATGGGTGATGAACTCGGTCGAGCCGAACGAATTGCTGTTCCa > 2:821076/1‑88 (MQ=255) atatCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTCAAATGGGTGATGAACTCGGTCGAGCCGAACGAATTGCTGTTCCAGCTgg > 2:417583/1‑93 (MQ=255) atatCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTCAAATGGGTGATGAACTCGGTCGAGCCGAACGAATTGCTGTTCCAGCTgg < 1:417583/93‑1 (MQ=255) atatCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTCAAATGGGTGATGAACTCGGTCGAGCCGAACGAATTGCTGTTCCAGCTGGCCGATGAGGCAGGCgtg > 2:704512/1‑110 (MQ=255) atatCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTCAAATGGGTGATGAACTCGGTCGAGCCGAACGAATTGCTGTTCCAGCTGGCCGATGAGGCAGGCgtg < 1:704512/110‑1 (MQ=255) atatCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTCAAATGGGTGATGAACTCGGTCGAGCCGAACGAATTGCTGTTCCAGCTGGCCGATGAGGCAGGCGTGGTGCTGCTGCCGGGCCGCGGCTTc > 2:591164/1‑134 (MQ=255) atatCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTCAAATGGGTGATGAACTCGGTCGAGCCGAACGAATTGCTGTTCCAGCTGGCCGATGAGGCAGGCGTGGTGCTGCTGCCGGGCCGCGGCTTc > 2:946125/1‑134 (MQ=255) atatCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTCAAATGGGTGATGAACTCGGTCGAGCCGAACGAATTGCTGTTCCAGCTGGCCGATGAGGCAGGCGTGGTGCTGCTGCCGGGCCGCGGCTTc > 1:647217/1‑134 (MQ=255) cagcTGGGCGGCAAGGCGATCGGTCCGGACTTCGTc > 2:250655/1‑36 (MQ=255) cagcTGGGCGGCAAGGCGATCGGTCCGGACTTCGTc < 1:250655/36‑1 (MQ=255) gcgtgtagtagtccacggcattcgggtcgtcgctttccggcgcgatgccgatctcgcggtacagcgcggccttgcggctgcggatcagccgcttcatc < 2:198258‑M1/98‑97 (MQ=255) gcgtgtagtagtccacggcattcgggtcgtcgctttccggcgcgatgccgat > 2:284199‑M1/1‑2 (MQ=255) | AGAACGCGATGAAGCGGCTGATCCGCAGCCGCAAGGCCGCGCTGTACCGCGAGATCGGCATCGCGCCGGAAAGCGACGACCCGAATGCCGTGGACTACTACACGCTGCTCGATATCGAGCAGCTGGGCGGCAAGGCGATCGGTCCGGACTTCGTCAAATGGGTGATGAACTCGGTCGAGCCGAACGAATTGCTGTTCCAGCTGGCCGATGAGGCAGGCGTGGTGCTGCTGCCGGGCCGCGGCTTC > AM260479/3257198‑3257442 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |