| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | = 1197838 | 9 (0.410) | 4 (0.200) | 4/186 | 1.6 | 30.5% | coding (970/1437 nt) | h16_B1061 | Nucleotidyltransferase/DNA polymerase involved in DNA repair |
| ? | AM260480 | = 1197865 | 10 (0.500) | coding (997/1437 nt) | h16_B1061 | Nucleotidyltransferase/DNA polymerase involved in DNA repair | |||||
GCCTGGCCCAGCCCAGCCGCGACCCCGCGCACCTGTCGCGGCTGCTGCGCGAGAAGCTCGACAAGCTCAATTTCCACGCCCCGGTGACCGGCCTGGCGCTGCGCGTTGAGGCGATGGCCGCATGCGTGCCGCACAGCGATGCGCTGTTCCCCGAGCCCGGCGGCACGCCGGAAGACCTGGGCCGCCTGCTCGATACGCTGATGGCGCGGCTGGGCCGTGACAACGTGCTGCAGCCGCGGCCGCTGGCCGACCACCGGCCCGAG > AM260480/1197707‑1197969 | gCCTGGCCCAGCCCAGCCGCGACCCCGCGCACCTGTCGCGGCTGCTGCGCGAGAAGCTCGACAAGCTCAATTTCCACGCCCCGGTGACCGGCCTGGCGCTGCGCGTTGAGGCGATGGCCGCATGCGTGCCGcac < 1:575258/134‑1 (MQ=255)gCCTGGCCCAGCCCAGCCGCGACCCCGCGCACCTGTCGCGGCTGCTGCGCGAGAAGCTCGACAAGCTCAATTTCCACGCCCCGGTGACCGGCCTGGCGCTGCGCGTTGAGGCGATGGCCGCATGCGTGCCGca > 2:1057289/1‑133 (MQ=255) cgcgCACCTGTCGCGGCTGCTGCGCGAGAAGCTCGACAAGCTCAATTTCCACGCCCCGGTGACCGGCCTGGCGCTGCGCGTTGAGGCGATGGCCGCATGCGTGCCGCACAGCGATGCGCTGTTCCCCGAGCCcg > 2:431622/1‑134 (MQ=255) aCCTGTCGCGGCTGCTGCGCGAGAAGCTCGACAAGCTCAATTTCCACGCCCCGGTGACCGGCCTGGCGCTGCGCGTTGAGGCGATGGCCGCATGCGTGCCGC < 1:363021‑M1/102‑1 (MQ=255) aCCTGTCGCGGCTGCTGCGCGAGAAGCTCGACAAGCTCAATTTCCACGCCCCGGTGACCGGCCTGGCGCTGCGCGTTGAGGCGATGGCCGCATGCGTGCCGC > 2:363021‑M1/1‑102 (MQ=255) gcgAGAAGCTCGACAAGCTCAATTTCCACGCCCCGGTGACCGGCCTGGCGCTGCGCGTTGATGCGATGGCCGCATGCGTGCCGCcgggctcggggaacag < 1:274705‑M1/100‑17 (MQ=255) gcgAGAAGCTCGACAAGCTCAATTTCCACGCCCCGGTGACCGGCCTGGCGCTGCGCGTTGATGCGATGGCCGCATGCGTGCCGCcgggctcggggaacag > 2:274705‑M1/1‑84 (MQ=255) cgAGAAGCTCGACAAGCTCAATTTCCACGCCCCGGTGACCGGCCTGGCGCTGCGCGTTGAGGCGATGGCCGCATGCGTGCCGCACAGCGATGCGCTGTTCCCCGAGCCCGGCGGCACGCCGGAAGACCTGGgcc < 2:913691/134‑1 (MQ=255) aaTTTCCACGCCCCGGTGACCGGCCTGGCGCTGCGCGTTGAGGCGATGGCCGCATGCGTGCCGCACAGCGATGCGCTGTTCCCCGAGCCCGGCGGCACGCCGGAAGACCTGGGCCGCCTGCTCGATACGCTg < 1:1013848/132‑1 (MQ=255) tGACCGGCCTGGCGCTGCGCGTTGAGGCGATGGCCGCATGCGTGCCGCACAGCGATGCGCTGTTCCCCGAGCCCGGCGGCACGCCGGAAGACCTGGGCCGCCTGCTCGATACGCTGATGGCGCGGCTGGGCCGt < 1:431622/134‑1 (MQ=255) gcgcTGCGCGTTGAGGCGATGGCCGCATGCGTGCCGCACAGCGATGCGCTGTTCCCCGAGCCCGGCGGCACGCCGGAAGACCTGGGCCGCCTGCTCGATACGCTGATGGCGCGGCTGGGCCGTGACAACGtgc < 2:210255/133‑1 (MQ=255) cgcTGCGCGTTGAGGCGATGGCCGCATGCGTGCCGCACAGCGATGCGCTGTTCCCCGAGCCCGGCGGCACGCCGGAAGACCTGGGCCGCCTGCTCGATACGCTGATGGCGCGGCTGGGCCGTGACAACGtgctg < 1:1057289/134‑1 (MQ=255) ttGAGGCGATGGCCGCATGCGTGCCGCcgggctcggggaacagcgcatcgctgtgc < 1:438851‑M1/56‑30 (MQ=255) ttGAGGCGATGGCCGCATGCGTGCCGCcgggctcggggaacagcgcatcgctgtgc > 2:438851‑M1/1‑27 (MQ=255) cGCACAGCGATGCGCTGTTCCCCGAGCCCGGCGGCACGCCGGAAGACCTGGGCCGCCTGCTCGATACGCTGATGGCGCGGCTGGGCCGTGACAACGTGCTGCAGCCGCGGCCGCTGGCCGACCACCGGCCCGAg > 2:861095/1‑134 (MQ=255) gCACAGCGATGCGCTGTTCCCCGAGCCCGgcggcacgcatgcggccatcgcctcaa < 1:438851‑M2/56‑28 (MQ=255) gCACAGCGATGCGCTGTTCCCCGAGCCCGgcggcacgcatgcggccatcgcctcaa > 2:438851‑M2/1‑29 (MQ=255) | GCCTGGCCCAGCCCAGCCGCGACCCCGCGCACCTGTCGCGGCTGCTGCGCGAGAAGCTCGACAAGCTCAATTTCCACGCCCCGGTGACCGGCCTGGCGCTGCGCGTTGAGGCGATGGCCGCATGCGTGCCGCACAGCGATGCGCTGTTCCCCGAGCCCGGCGGCACGCCGGAAGACCTGGGCCGCCTGCTCGATACGCTGATGGCGCGGCTGGGCCGTGACAACGTGCTGCAGCCGCGGCCGCTGGCCGACCACCGGCCCGAG > AM260480/1197707‑1197969 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |