| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | = 1447185 | 12 (0.550) | 4 (0.180) | 4/202 | 1.7 | 25.1% | coding (113/726 nt) | h16_B1290 | conserved hypothetical protein |
| ? | AM260480 | 1447230 = | 12 (0.550) | coding (158/726 nt) | h16_B1290 | conserved hypothetical protein | |||||
CCGCATGACCTTGCCAGCGCACCGTTACGCCATCTACCTGGCGCCCTCAGATCCGTTCCGCACGTTTGGCAGCCAGTGGCTCGGCCGCGACGCCGATACCGGCGCCGCGCTGCCCGCGCCGGCGGGCATGGCGGCGGCGCCCGACGAATGGGTCAAGGCCCCGGCGCGCTACGGCCTGCATGCCACGCTGAAGCCGCCGTTCCGGCT > AM260480/1447069‑1447275 | ccGCATGACCTTGCCAGCGCACCGTTACGCCATCTACCTGGCGCCCTCAGATCCGTTCCGCACGTTTGGCAGCCAGTGGCTCGGCCGCGACGCCGATACCGGCGCCGCGCTGCCCGCGCCGGCGGGCAt > 1:828708/1‑129 (MQ=255)ccGCATGACCTTGCCAGCGCACCGTTACGCCATCTACCTGGCGCCCTCAGATCCGTTCCGCACGTTTGGCAGCCAGTGGCTCGGCCGCGACGCCGATACCGGCGCCGCGCTGCCCGCGCCGGCGGGCAt < 2:828708/129‑1 (MQ=255) cTTGCCAGCGCACCGTTACGCCATCTACCTGGCGCCCTCAGATCCGTTCCGCACGTTTGGCAGCCAGTGGCTCGGCCGCGACGCCGATACCGGCGCCGCGCTGCCcgcg > 1:226521/1‑109 (MQ=255) cTTGCCAGCGCACCGTTACGCCATCTACCTGGCGCCCTCAGATCCGTTCCGCACGTTTGGCAGCCAGTGGCTCGGCCGCGACGCCGATACCGGCGCCGCGCTGCCcgcg < 2:226521/109‑1 (MQ=255) ccGTTACGCCATCTACCTGGCGCCCTCAGATCCGTTCCGCACGTTTGGCAGCCAGTGGCTCGGCCGCGACGCCGATACCGGCGCCGCGCTGCCCGCGCCGGCGGGCATGGCGGCGGCGCCCGACGAATGGGTc > 2:759523/1‑133 (MQ=255) ccGTTACGCCATCTACCTGGCGCCCTCAGATCCGTTCCGCACGTTTGGCAGCCAGTGGCTCGGCCGCGACGCCGATACCGGCGCCGCCATGCCCGCcggcgcgctacggcctgcatgccacgctgaagccgc < 1:625557‑M1/132‑37 (MQ=255) ccGTTACGCCATCTACCTGGCGCCCTCAGATCCGTTCCGCACGTTTGGCAGCCAGTGGCTCGGCCGCGACGCCGATACCGGCGCCGCCATGCCCGCcggcgcgctacggcctgcatgccacgctgaagccgc > 2:625557‑M1/1‑96 (MQ=255) gTTACGCCATCTACCTGGCGCCCTCAGATCCGTTCCGCACGTTTGGCAGCCAGTGGCTCGGCCGCGACGCCGATACCGGCGCCGCGCTGCCCGCGCCGGCGGGCATGGCGGCGGCGCCCGACGAATGGGTCAAg < 1:279403/134‑1 (MQ=255) ccTGGCGCCCTCAGATCCGTTCCGCACGTTTGGCAGCCAGTGGCTCGGCCGCGACGCCGATACCGGCGCCGCGCTGCCCGCGCCGGCGGGCATGGCGGCGGCGCCCGACGAATGGGTCAAGGCCCCGgcg < 1:759523/130‑1 (MQ=255) cGCACGTTTGGCAGCCAGTGGCTCGGCCGCGACGCCGATACCGGCGCCGCGCTGCCCGCGCCGGCGGGCATGGCGGCGGCGCCCGACGAATGGGTCAAGGCCCCGGCGCGCTACGGCCTGCATGCCACGCTGaa < 2:933896/134‑1 (MQ=255) cACGTTTGGCAGCCAGTGGCTCGGCCGCGACGCCGATACCGGCGCCGCGCTGCCCGCGCCGGCGGGCATGGCGGCGGCGCCCGACGAATGGGTCAAGGCCCCGGCGCGCTACGGCCTGCATGCCACGCTGAAgc > 1:13415/1‑134 (MQ=255) cAGCCAGTGGCTCGGCCGCGACGCCGATACCGCCGCCGCCATGCCCGCcggcgcgctacggcctgcatgccacgctgaagccgccgttccggct < 2:999835‑M1/94‑47 (MQ=255) cAGCCAGTGGCTCGGCCGCGACGCCGATACCGCCGCCGCCATGCCCGCcggcgcgctacggcctgcatgccacgctgaagccgccgttccggct > 1:999835‑M1/1‑48 (MQ=255) cAGTGGCTCGGCCGCGACGCCGATACCGGCGCCGCGCTGCCCGCGCCGGCGGGCATGGCGGCGGCGCCCGACGAATGGGTCAAGGCCCCGGCGCGCTACGGCCTGCATGCCACGCTGAAGCCGCCGTTCCGGCt < 2:13415/134‑1 (MQ=255) cTCGGCCGCGACGCCGATACCGGCGCCGCGCTGCCCGC > 2:494962‑M1/1‑38 (MQ=255) cTCGGCCGCGACGCCGATACCGGCGCCGCGCTGCCCGC < 1:494962‑M1/38‑1 (MQ=255) cGGCGCCGCGCTGCCCGCGCCGGCGGGCATGGCGGCGGCGCCCGACGAATGGGTCAAGGCCCCGGCGCGCTACGGCCTGCATGCCACGCTGAAgccgc > 2:562171/1‑98 (MQ=255) cGGCGCCGCGCTGCCCGCGCCGGCGGGCATGGCGGCGGCGCCCGACGAATGGGTCAAGGCCCCGGCGCGCTACGGCCTGCATGCCACGCTGAAgccgc < 1:562171/98‑1 (MQ=255) | CCGCATGACCTTGCCAGCGCACCGTTACGCCATCTACCTGGCGCCCTCAGATCCGTTCCGCACGTTTGGCAGCCAGTGGCTCGGCCGCGACGCCGATACCGGCGCCGCGCTGCCCGCGCCGGCGGGCATGGCGGCGGCGCCCGACGAATGGGTCAAGGCCCCGGCGCGCTACGGCCTGCATGCCACGCTGAAGCCGCCGTTCCGGCT > AM260480/1447069‑1447275 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |