New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	= 2465193	9 (0.410)	3 (0.150)	3/188	1.8	22.8%	coding (1158/2637 nt)	h16_B2176	predicted transmembrane exporter protein
	?	AM260480	= 2465234	12 (0.590)					coding (1199/2637 nt)	h16_B2176	predicted transmembrane exporter protein

GACTTCGGCATCCAGTTCGGCGTGCGCTACCGCGCCGAGCGCCATGACCGCGACCATATCGTCGAAGCGCTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGATCGCCGGCGTGGGCATGATGGTGGCATTCGCCACCACCTTCACGCTGCTGCCGGCGCTGATCTGCGTG  >  AM260480/2465068‑2465322                                                                                                                              |                                                                                                                                  gACTTCGGCATCCAGTTCGGCGTGCGCTACCGCGCCGAGCGCCATGACCGCGACCATATCGTCGAAGCGCTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGccgcggta                                                                                                                           <  1:271713‑M1/134‑9 (MQ=255)                  cGGCGTGCGCTACCGCGCCGAGCGCCATGACCGCGACCATATCGTCGAAGCGCTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTg                                                                                                           <  1:255309/133‑1 (MQ=255)                             aCCGCGCCGAGCGCCATGACCGCGACCATATCGTCGAAGCGCTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTAc                                                                                               >  2:85962/1‑134 (MQ=255)                              ccGCGCCGAGCGCCATGACCGCGACCATATCGTCGAAGCGCTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTAcc                                                                                              <  2:847206/134‑1 (MQ=255)                                     gAGCGCCATGACCGCGACCATATCGTCGAAGCGCTGGTGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACG                                                                                                                                   <  2:41875‑M1/90‑1 (MQ=255)                                     gAGCGCCATGACCGCGACCATATCGTCGAAGCGCTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGAGGCCACG                                                                                                                                   >  1:41875‑M1/1‑90 (MQ=255)                                       gcgcCATGACCGCGACCATATCGTCGAAGCGCTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGcg                                                                                        >  2:975517‑M2/1‑129 (MQ=255)                                       gcgcCATGACCGCGACCATATCGTCGAAGCGCTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGcg                                                                                        <  1:975517‑M2/131‑3 (MQ=255)                                                                    cgcTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGGCGGCGGCGt                                                                                                                         <  1:85880/69‑1 (MQ=255)                                                                    cgcTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGGCGGCGGCGt                                                                                                                         >  2:85880/1‑69 (MQ=255)                                                                      cTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGATCGcc                                                                 <  2:7398/123‑1 (MQ=255)                                                                      cTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGATCGcc                                                                 >  1:7398/1‑123 (MQ=255)                                                                                                        tggcgctggcgGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGcg                                                                                        <  2:573574‑M2/66‑3 (MQ=255)                                                                                                        tggcgctggcgGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGcg                                                                                        >  1:573574‑M2/1‑64 (MQ=255)                                                                                                         ggcgctggcgGCCGCGGCCACGccgcggtagtcgg                                                                                                                      >  1:912570‑M1/1‑22 (MQ=255)                                                                                                         ggcgctggcgGCCGCGGCCACGccgcggtagtcgg                                                                                                                      <  2:912570‑M1/35‑14 (MQ=255)                                                                                                          gcgctggcgGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGATCGCCGGCGTGGGCATGATGGTGGCATTCGCCACCACCTTCACGCTGCTGcc                  >  1:748738/1‑134 (MQ=255)                                                                                                                    ccgcggccACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGATCGCCGGCGTGGGCATGATGGTGGCATTCGCCACCACCTTCACGCTGCTGCCGGCGCTGATc        <  2:748738/134‑1 (MQ=255)                                                                                                                             cgccgcggtagtcggtgggcaggaagcagaagaacgccgccgccgtggccgcggccgccagcgccagcggagcgcccaccgcgcgcgcggccagccccagcgcttcgacgatatggtcgcggtcatggcgc  <  1:975517‑M1/131‑130 (MQ=255)                                                                                                                             cgccgcggtagtcggtgggcaggaagcagaagaacgccgccgccgtggccgcggccgccagcgccagcggagcgcccaccgcgcgcgcggccagccccagcgcttcgacgatatggtcgcggtcatggcgc  >  2:975517‑M1/1‑2 (MQ=255)                                                                                                                             cgccgcggtagtcggtgggcaggaagcagaagaacgccgccgccgtggccgcggccgccagcgcca                                                                   <  2:573574‑M1/66‑65 (MQ=255)                                                                                                                             cgccgcggtagtcggtgggcaggaagcagaagaacgccgccgccgtggccgcggccgccagcgcca                                                                   >  1:573574‑M1/1‑2 (MQ=255)                                                                                                                              |                                                                                                                                  GACTTCGGCATCCAGTTCGGCGTGCGCTACCGCGCCGAGCGCCATGACCGCGACCATATCGTCGAAGCGCTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGATCGCCGGCGTGGGCATGATGGTGGCATTCGCCACCACCTTCACGCTGCTGCCGGCGCTGATCTGCGTG  >  AM260480/2465068‑2465322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.