New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	= 2465193	9 (0.410)	3 (0.150)	3/188	1.8	22.8%	coding (1158/2637 nt)	h16_B2176	predicted transmembrane exporter protein
	?	AM260480	= 2465234	12 (0.590)					coding (1199/2637 nt)	h16_B2176	predicted transmembrane exporter protein

GCGCCATGACCGCGACCATATCGTCGAAGCGCTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGATCGCCGGCGTGGGCATGATGGTGGCATTCGCCACCACCTTCACGCTGCTGCCGGCGCTGATCTGCGTGCTCAAGCCCGGCGGCGAGCCCGAGGCGCCGGGCTTCGC  >  AM260480/2465106‑2465360                                                                                                                                 |                                                                                                                               gcgcCATGACCGCGACCATATCGTCGAAGCGCTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGcg                                                                                                                              >  2:975517‑M2/1‑129 (MQ=255) gcgcCATGACCGCGACCATATCGTCGAAGCGCTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGcg                                                                                                                              <  1:975517‑M2/131‑3 (MQ=255)                                cTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGATCGcc                                                                                                       <  2:7398/123‑1 (MQ=255)                                cTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGATCGcc                                                                                                       >  1:7398/1‑123 (MQ=255)                                                                  tggcgctggcgGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGcg                                                                                                                              >  1:573574‑M2/1‑64 (MQ=255)                                                                  tggcgctggcgGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGcg                                                                                                                              <  2:573574‑M2/66‑3 (MQ=255)                                                                    gcgctggcgGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGATCGCCGGCGTGGGCATGATGGTGGCATTCGCCACCACCTTCACGCTGCTGcc                                                        >  1:748738/1‑134 (MQ=255)                                                                              ccgcggccACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGATCGCCGGCGTGGGCATGATGGTGGCATTCGCCACCACCTTCACGCTGCTGCCGGCGCTGATc                                              <  2:748738/134‑1 (MQ=255)                                                                                            gcggcgTTCTTCTGCTTCCTGCCCACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGATCGCCGGCGTggg                                                                                               <  2:1023567/71‑1 (MQ=255)                                                                                            gcggcgTTCTTCTGCTTCCTGCCCACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGATCGCCGGCGTggg                                                                                               >  1:1023567/1‑71 (MQ=255)                                                                                                              cTGCCCACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGATCGCCGGCGTGGGCATGATGGTGGCATTCGCCACCACCTTCACGCTGCTGCCGGCGCTGATCTGCGTGCTCAAGCCCGGCGGCGAGCCCGAgg               <  2:1034617/133‑1 (MQ=255)                                                                                                                   cACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGATCGCCGGCGTGGGCATGATGGTGGCATTCGCCACCACCTTCACGCTGCTGCCGGCGCTGAt                                               >  2:391557/1‑96 (MQ=255)                                                                                                                   cACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGATCGCCGGCGTGGGCATGATGGTGGCATTCGCCACCACCTTCACGCTGCTGCCGGCGCTGAt                                               <  1:391557/96‑1 (MQ=255)                                                                                                                   cACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGATCGCCGGCGTGGGCATGATGGTGGCATTCGCCACCACCTTCACGCTGCTGCCGGCGCTGATCTGCGTGCTCAAGCCCGGCGGCGAGCCCGAGGCGCCgg         >  2:504180/1‑134 (MQ=255)                                                                                                                   cACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGAACGCCGGCGTGGGCATGATGGTGGCATTCGCCACCACCTTCACGCTGCTGCCGGCGCTGAt                                               <  2:35966/96‑1 (MQ=255)                                                                                                                   cACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGAACGCCGGCGTGGGCATGATGGTGGCATTCGCCACCACCTTCACGCTGCTGCCGGCGCTGAt                                               >  1:35966/1‑96 (MQ=255)                                                                                                                     ccGACTACCGCGGcgtggccgcggccgccagcgcc                                                                                                          >  1:912570‑M2/1‑13 (MQ=255)                                                                                                                     ccGACTACCGCGGcgtggccgcggccgccagcgcc                                                                                                          <  2:912570‑M2/35‑23 (MQ=255)                                                                                                                          tACCGCGGcgtggccgcggccgccagcgccagcggagcgcccaccgcgcgcgcggccagccccagcgcttcgacgatatggtcgcggtcatggcgctcggcgcggtagcgcacgccgaactggatgccgaagtc  <  1:271713‑M2/134‑127 (MQ=255)                                                                                                                                 |                                                                                                                               GCGCCATGACCGCGACCATATCGTCGAAGCGCTGGGGCTGGCCGCGCGCGCGGTGGGCGCTCCGCTGGCGCTGGCGGCCGCGGCCACGGCGGCGGCGTTCTTCTGCTTCCTGCCCACCGACTACCGCGGCGTGGCCGAGCTGGGGCTGATCGCCGGCGTGGGCATGATGGTGGCATTCGCCACCACCTTCACGCTGCTGCCGGCGCTGATCTGCGTGCTCAAGCCCGGCGGCGAGCCCGAGGCGCCGGGCTTCGC  >  AM260480/2465106‑2465360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.