| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | = 1179700 | 7 (0.320) | 3 (0.150) | 3/188 | 1.8 | 26.7% | coding (961/1206 nt) | h16_B1043 | conserved hypothetical protein |
| ? | AM260480 | = 1179725 | 10 (0.490) | coding (986/1206 nt) | h16_B1043 | conserved hypothetical protein | |||||
GCAGCTCAACCGGCGCTTCATGCGCGCGGCGGGCCGTCCGATGACCGGCTACGACTGGGCTGCCTGGGTGGCGGTCAAGGCCATTGCCGAGAGCGTGGCGCGCCTGCCCGGGGCCGGGTTTGCCGGACAGGCGCAGGCGCTTGCCGCCGGGCAGGTGGTGGTGGACGGCTTCAAGGGGCCGCCGCTGTCGTTCCGCCGCTGGGACCGCCAGCTGCGCCAGCCGGTGTTGCTGGCCCACCCCGACGGCGTGGCCGGCATGGC > AM260480/1179594‑1179854 | gCAGCTCAACCGGCGCTTCATGCGCGCGGCGGGCCGTCCGATGACCGGCTACGACTGGGCTGCCTGGGTGGCGGTCAAGGCCATTGCCGAGAGCGTGGCGCGCCTGCCCGGGGCCGGGTTTGCCGGACAGGCg < 2:279016‑M2/133‑2 (MQ=255) gCTCAACCGGCGCTTCATGCGCGCGGCGGGCCGTCCGATGACCGGCTACGACTGGGCTGCCTGGGTGGCGGTCAAGGCCATTGCCGAGAGCGTGGCGCGCCTGCCCGGGGCCGGGTTTGCCGGACAGGCgcagg < 1:875752‑M2/134‑6 (MQ=255) ccGGCGCTTCATGCGCGCGGCGGGCCGTCCGATGACCGGCTACGACTGGGCTGCCTGGGTGGCGGTCAAGGCCATTGCCGAGAGCGTGGCGCGCCTGCCCGGGGCCGGGTTTGCCGGACAGGCGCAGGCGCTTg < 1:279016/134‑1 (MQ=255) gcggGCCGTCCGATGACCGGCTACGACTGGGCTGCCTGGGTGGCGGTCAAGGCCATTGCCGAGAGCGTGGCGCGCCTGCCCGGGGCCGGGTTTGCCGGACAGGCGCAGGCGCTTGCCGCCGGGCAggtggtggt < 1:379512/134‑1 (MQ=255) cGATGACCGGCTACGACTGGGCTGCCTGGGTGGCGGTCAAGGCCATTGCCGAGAGCGTGGCGCGCCTGCCCGGGGCCGGGTTTGCCGGACAGGCgcgccccgctctcggcaatggccttgaccgccacccaggc > 1:616071‑M2/1‑94 (MQ=255) gagaGCGTGGCGCGCCTGCCCGGGGCCGGGTTTGCCGGACAGGCGCAGGCGCTTGCCGCCGGGCAGGTGGTGGTGGACGGCTTCAAGGGGCCGCCGCTGTCGTTCcgccgc > 1:490604/1‑111 (MQ=255) gagaGCGTGGCGCGCCTGCCCGGGGCCGGGTTTGCCGGACAGGCGCAGGCGCTTGCCGCCGGGCAGGTGGTGGTGGACGGCTTCAAGGGGCCGCCGCTGTCGTTCcgccgc < 2:490604/111‑1 (MQ=255) gcCTGCCCGGGGCCGGGTTTGCCGGACAGGCGCAGGCGCTTGCCGCCGGGCAGGTGGTGGTGGACGGCTTCAAGGGGCCGCCGCTGTCGTTCCGCCGCTGGGACCGCCAGCTGCGCCAGCCGGTGTTGCTGGcc > 1:131968/1‑134 (MQ=255) tGCCCGGGGCCGGGTTTGCCGGACAGGCgcaggcgcgccacgctctcggcaatggccttgaccgccacccaggcagcccagtcgtagccggtcatcggacggcccgccgcgcgcatgaagcgcc > 1:269653‑M2/1‑28 (MQ=255) tGCCCGGGGCCGGGTTTGCCGGACAGGCgcaggcgcgccacgctctcggcaatggccttgaccgccacccaggcagcccagtcgtagccggtcatcggacggcccgccgcgcgcatgaagcgcc < 2:269653‑M2/124‑97 (MQ=255) ggCCGGGTTTGCCGGACAGGCGCAGGCGCTTGCCGCCGGGCAGGTGGTGGTGGACGGCTTCAAGGGGCCGCCGCTGTCGTTCCGCCGCTGGGACCGCCAGCTGCGCCAGCCGGTGTTGCTGGCCCACCCCGACg > 1:692729/1‑134 (MQ=255) cGGGTTTGCCGGACAGGCGCAGGCGCTTGCCGCCGGGCAGGTGGTGGTGGACGGCTTCAAGGGGCCGCCGCTGTCGTTCCGCCGCTGGGACCGCCAGCTGCGCCAGCCGGTGTTGCTGGCCCACCCCGACGGCg < 1:430994/134‑1 (MQ=255) gCCGGACAGGCGCAGGCGCTTGCCGCCGGGCAGGTGGTGGTGGACGGCTTCAAGGGGCCGCCGCTGTCGTTCCGCCGCTGGGACCGCCAGCTGCGCCAGCCGGTGTTGCTGGCCCACCCCGACGGCGTGGCCg < 2:692729/133‑1 (MQ=255) ggACAGGCGCAGGCGCTTGCCGCCGGGCAGGTGGTGGTGGACGGCTTCAAGGGGCCGCCGCTGTCGTTCCGCCGCTGGGACCGCCAGCTGCGCCAGCCGGTGTTGCTGGCCCACCCCGACGGCGTGGCCGGCAt < 2:131968/134‑1 (MQ=255) caggcgcaggcgCTTGCCTCCGGGCAGGTGGTGGTGGACGGCTTCAAGGGGCCGCCGCTGTCGTTCCGCCGCTGGGACCGCCAGCTGCGCCAGCCGGTGTTGCTGGCCCACCCCGACGGCGTGGCCGGCATGGc > 2:279839/1‑134 (MQ=255) | GCAGCTCAACCGGCGCTTCATGCGCGCGGCGGGCCGTCCGATGACCGGCTACGACTGGGCTGCCTGGGTGGCGGTCAAGGCCATTGCCGAGAGCGTGGCGCGCCTGCCCGGGGCCGGGTTTGCCGGACAGGCGCAGGCGCTTGCCGCCGGGCAGGTGGTGGTGGACGGCTTCAAGGGGCCGCCGCTGTCGTTCCGCCGCTGGGACCGCCAGCTGCGCCAGCCGGTGTTGCTGGCCCACCCCGACGGCGTGGCCGGCATGGC > AM260480/1179594‑1179854 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |