New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AM260480 = 219207716 (0.730)4 (0.180) 4/204 1.7 20.0% coding (368/822 nt) h16_B1943 putative non‑heme chloroperoxidase
?AM260480 2192114 = 16 (0.730)coding (331/822 nt) h16_B1943 putative non‑heme chloroperoxidase

CGAGCGGTTGTCGGCCACGCCCTTGCGGATGCCGTCGAACACATCGATCGGCAGCCCGCCGGGGTTGGCCGCGGTCTTGAGCATGATCGGCGGCACCGCGCCGATCAGCACCGCCTTGGCGACACGGCCGGTGCCATGGCGGCCGATGTAGTGCGCCACCTCGCCGCCACCGGTGGAATGCCCCACCAGCGTGGCATCGCGCAGGTCCAGCGCGTCCAGCAGCGCGGCCAGGTCGTCGGCGTAGGTGTCCATGTCGTTGCC  >  AM260480/2191986‑2192246
                                                                                                                                |                                                                                                                                    
cGAGCGGTTGTCGGCCACGCCCTTGCGGATGCCGTCGAACACATCGATCGGCAGCCCGCCGGGGTTGGCCGCGGTCTTGAGCATGATCGGCGGCACCGCGCCGATCAGCACCGCCTTGGCGACACGGCCGGTGc                                                                                                                                 >  1:191697/1‑134 (MQ=255)
     ggTTGTCGGCCACGCCCTTGCGGATGCCGTCGAACACATCGATCGGCAGCCCGCCGGGGTTGGCCGCGGTCTTGAGCATGATCGGCGGCACCGCGCCGATCAGCACCGCCTTGGCGACACGGCCGGTGCCATgg                                                                                                                            <  2:191697/134‑1 (MQ=255)
                     cTTGCGGATGCCGTCGAACACATCGATCGGCAGCCCGCCGGGGTTGGCCGCGGTCTTGAGCATGATCGGCGGCACCGCGCCGATCAGCACCGCCTTGGCGACACGGCCGGTGCCATGGCGGCCGATGTAGTgcg                                                                                                            >  1:775062/1‑134 (MQ=255)
                                         ggttgtcggccacgcccttgcggatgccgtcgaacacatcgatcggcagcccgccggggttggccgcggtcttgagcatgatcggcgCGGTGCCATGGCGGCCGATGTAGTGCGCCACCTCGCCGCCACCGGTg                                                                                        >  1:681688‑M2/88‑134 (MQ=255)
                                              atcgGCAGCCCGCCGGGGTTGGCCGCGGTCTTGAGCATGATCGGCGGCACCGCGCCGATCAGCACCGCCTTGGCGACACGGCCGGTGCCATGGCGGCCGATGTAGTGCGCCACCTCGCCGCCACCg                                                                                           <  2:815027/126‑1 (MQ=255)
                                              atcgGCAGCCCGCCGGGGTTGGCCGCGGTCTTGAGCATGATCGGCGGCACCGCGCCGATCAGCACCGCCTTGGCGACACGGCCGGTGCCATGGCGGCCGATGTAGTGCGCCACCTCGCCGCCACCg                                                                                           >  1:815027/1‑126 (MQ=255)
                                              atcgGCAGCCCGCCGGGGTTGGCCGCGGTCTTGAGCATGATCGGCGGCACCGCGCCGATCAGCACCGCCTTGGCGACACGGCCGGTGCCATGGCGGCCGATGTAGTGCGCCACCTCGCCGCCACCGGTGGAATg                                                                                   <  1:92716/134‑1 (MQ=255)
                                              atcgGCAGCCCGCCGGGGTTGGCCGCGGTCTTGAGCATGATCGGCGGCACCGCGCCGATCAGCACCGCCTTGGCGACACGGCCGGTGCCATGGCGGCCGATGTAGTGCGCCACCTCGCCGCCACCGGTGGAATg                                                                                   >  2:770142/1‑134 (MQ=255)
                                                ggccacgcccttgcggatgccgtcgaacacatcgatcggcagcccgccggggttggccgcggtcttgagcatgatcggcgCGGTGCCATGGCGGCCGATGTAGTGCGCCACCTCGCCGCCACCGGTGGAATGcc                                                                                 <  2:681688‑M2/54‑1 (MQ=255)
                                                         cttgcggatgccgtcgaacacatcgatcggcagcccgccggggttggccgcggtcttgagcatgatcggcgCGGTGc                                                                                                                                 <  1:687217‑M2/6‑1 (MQ=255)
                                                         cttgcggatgccgtcgaacacatcgatcggcagcccgccggggttggccgcggtcttgagcatgatcggcgCGGTGc                                                                                                                                 >  2:687217‑M2/72‑77 (MQ=255)
                                                                            ttGAGCATGATCGGCGGCACCGCGCCGATCAGCACCGCCTTGGCGACACGGCCGGTGCCATGGCGGCCGATGTAGTGCGCCACCTCGCCGCCACCGGTGGAATGCCCCACCAGCGTGGCAt                                                                  <  2:1029492/121‑1 (MQ=255)
                                                                            ttGAGCATGATCGGCGGCACCGCGCCGATCAGCACCGCCTTGGCGACACGGCCGGTGCCATGGCGGCCGATGTAGTGCGCCACCTCGCCGCCACCGGTGGAATGCCCCACCAGCGTGGCAt                                                                  >  1:1029492/1‑121 (MQ=255)
                                                                                     aTCGGCGGCACCGCGCCGATCAGCACCGCCTTGGCGACACGGCCGGTGCCATGGCGGCCGATGTAGTGCGCCACCTCGCCGCCACCGGTGGAATGCCCCACCAGCGTGGCATCGCGCAGGTCCAGCGCGTCca                                             <  1:770142/133‑1 (MQ=255)
                                                                                                     cGATCAGCACCGCCTTGGCGACACGGCCGGTGCCATGGCGGCCGATGTAGTGCGCCACCTCGCCGCCACCGGTGGAATGCCCCACCAGCGTGGCATCGCGCAGGTCCAGCGCGTCCAGCAGCGCGGCCAGgtcg                            >  1:957006/1‑134 (MQ=255)
                                                                                                                     ggCGACACGGCCGGTGCCATGGCGGCCGATGTAGTGCGCCACCTCGCCGCCACCGGTGGAATGCCCCACCAGCGTGGCATCGCGCAGGTCCAGCGCGTCCAGCAGCGCGGCCacgggc                            >  1:696347/1‑113 (MQ=255)
                                                                                                                     ggCGACACGGCCGGTGCCATGGCGGCCGATGTAGTGCGCCACCTCGCCGCCACCGGTGGAATGCCCCACCAGCGTGGCATCGCGCAGGTCCAGCGCGTCCAGCAGCGCGGCCacgggc                            <  2:696347/118‑6 (MQ=255)
                                                                                                                         acacGGCCGGTGCCATGGCGGCCGATGTAGTGCGCCACCTCGCCGCCACCGGTGGAATGCCCCACCAGCGTGGCATc                                                                 <  1:377732/77‑1 (MQ=255)
                                                                                                                         acacGGCCGGTGCCATGGCGGCCGATGTAGTGCGCCACCTCGCCGCCACCGGTGGAATGCCCCACCAGCGTGGCATc                                                                 >  2:377732/1‑77 (MQ=255)
                                                                                                                               ccGGTGCCATGGCGGCCGATGTAGTGCGCCACCTCGCCGCCACCGGTGGAATGCCCCACCAGCGTGGCATCGCGCAGGTCCAGCGCGTCCAGCAGCGCGGCCAGGTCGTCGGCGTAGGTGTCCATGTCGTTGcc  >  1:858947/1‑134 (MQ=255)
                                                                                                                                |                                                                                                                                    
CGAGCGGTTGTCGGCCACGCCCTTGCGGATGCCGTCGAACACATCGATCGGCAGCCCGCCGGGGTTGGCCGCGGTCTTGAGCATGATCGGCGGCACCGCGCCGATCAGCACCGCCTTGGCGACACGGCCGGTGCCATGGCGGCCGATGTAGTGCGCCACCTCGCCGCCACCGGTGGAATGCCCCACCAGCGTGGCATCGCGCAGGTCCAGCGCGTCCAGCAGCGCGGCCAGGTCGTCGGCGTAGGTGTCCATGTCGTTGCC  >  AM260480/2191986‑2192246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.