| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | = 2311316 | 0 (0.000) | 28 (1.230) | 24/200 | 0.1 | 100% | coding (452/462 nt) | h16_B2054 | putative transporter |
| ? | AY305378 | 436316 = | NA (NA) | noncoding (1/2 nt) | direct | target site duplication | |||||
CCGGCGCCCAGATTGCACTTTGCAGCTCGCACAGCGGGTAAGCATCTACACTTAATAACTTATCCTTTTAGGATCTCTGTAAGACTTTTTGAGCGAATTTCGGCGCTTGTGGCCTGTAATAATTGCTATTACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGCAAAAGAACGATTTGACCAGGCTCGGCAATTTCTGGATGCGACGCAAAGCGCCGAGCGCCAGTTTCTTCATGTCGTTCTT > AY305378/436187‑436449 | gcacgccgatcagggtacccagcacgcagcccaggaaggcgtaggccaggttctgcagcgacagggccgtggaaaagcccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACt > 1:166921‑M2/130‑133 (MQ=255) cacgccgatcagggtacccagcacgcagcccaggaaggcgtaggccaggttctgcagcgacagggccgtggaaaagcccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTaa > 1:63324‑M2/129‑134 (MQ=255) gCTCGCACAGCGGGTAAGCATCTACACTTAATAACTTATCCTTTTAGGATCTCTGTAAGACTTTTTGAGCGAATTTCGGCGCTTGTGGCCTGTAATAATTGCTATTACTAACCTTACTGAAAGTAATGTcaca > 2:946123/1‑133 (MQ=255) caggaaggcgtaggccaggttctgcagcgacagggccgtggaaaagcccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTAACCTTACTGAAAGTAATGTcac < 1:519653‑M2/27‑1 (MQ=255) caggaaggcgtaggccaggttctgcagcgacagggccgtggaaaagcccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTAACCTTACTGAAAGTAATGTcac > 2:519653‑M2/99‑125 (MQ=255) taggccaggttctgcagcgacagggccgtggaaaagcccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCAtt < 2:63324‑M2/46‑1 (MQ=255) ggccaggttctgcagcgacagggccgtggaaaagcccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTAACCTTACTg < 1:323571‑M2/14‑1 (MQ=255) ggccaggttctgcagcgacagggccgtggaaaagcccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTAACCTTACTg > 2:323571‑M2/87‑100 (MQ=255) ttAATAACTTATCCTTTTAGGATCTCTGTAAGGCTTTTTGAGCGAATTTCGGCGCTTGTGGCCTGTAATAATTGCTATTACTAACCTTACTGAAAGTAATGt < 2:740084/102‑1 (MQ=255) ttAATAACTTATCCTTTTAGGATCTCTGTAAGACTTTTTGAGCGAATTTCGGCGCTTGTGGCCTGTAATAATTGCTATTACTAACCTTACTGAAAGTAATGt > 1:740084/1‑102 (MQ=255) ttAATAACTTATCCTTTTAGGATCTCTGTAAGACTTTTTGAGCGAATTTCGGCGCTTGTGGCCTGTAATAATTGCTATTACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGc > 2:153773/1‑133 (MQ=255) aCTTATCCTTTTAGGATCTCTGTAAGACTTTTTGAGCGAATTTCGGCGCTTGTGGCCTGTAATAATTGCTATTACTAACCTTACTGaa < 2:38561/88‑1 (MQ=255) aCTTATCCTTTTAGGATCTCTGTAAGACTTTTTGAGCGAATTTCGGCGCTTGTGGCCTGTAATAATTGCTATTACTAACCTTACTGaa > 1:38561/1‑88 (MQ=255) cgacagggccgtggaaaagcccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTAc < 2:525944‑M2/3‑1 (MQ=255) cgacagggccgtggaaaagcccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTAc > 1:525944‑M2/72‑74 (MQ=255) gacagggccgtggaaaagcccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGCAAAAGAAc > 1:516722‑M2/71‑133 (MQ=255) ggccgtggaaaagcccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTAACCTTACTGAAAGTAAt < 2:211148‑M2/22‑1 (MQ=255) ggccgtggaaaagcccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTAACCTTACTGAAAGTAAt > 1:211148‑M2/66‑87 (MQ=255) ttttAGGATCTCTGTAAGACTTTTTGAGCGAATTTCGGCGCTTGTGGCCTGTAATAATTGCTATTAc > 2:556944/1‑67 (MQ=255) ttttAGGATCTCTGTAAGACTTTTTGAGCGAATTTCGGCGCTTGTGGCCTGTAATAATTGCTATTAc < 1:556944/67‑1 (MQ=255) ccgtggaaaagcccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGCaa > 1:343604‑M2/64‑120 (MQ=255) ccgtggaaaagcccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGCaa < 2:343604‑M2/57‑1 (MQ=255) cgtggaaaagcccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGCAAAAGAACGATTTGAcc < 2:516722‑M2/72‑1 (MQ=255) aaagcccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGCAAAAGAACGATTTGACCAGGCTc > 2:246640‑M2/57‑134 (MQ=255) tGTAAGACTTTTTGAGCGAATTTCGGCGCTTGTGGCCTGTAATAATTGCTATTACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGCAAAAGAACGATTTGACCAGGCTCGGc > 2:1042169/1‑133 (MQ=255) ccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTAACCTTACTGaa < 1:721824‑M2/16‑1 (MQ=255) ccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTAACCTTACTGaa > 2:721824‑M2/52‑67 (MQ=255) ccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTAACCTTACTGAAAGt > 1:588008‑M2/52‑70 (MQ=255) ccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTAACCTTACTGAAAGt < 2:588008‑M2/19‑1 (MQ=255) ccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTAACCTTACTGAAAGTAATGTCACATAGc > 2:505156‑M2/52‑83 (MQ=255) ccagcgcaaggtgatcaaacaattccatggtcggcgctccttaaccggtgaTACTAACCTTACTGAAAGTAATGTCACATAGc < 1:505156‑M2/32‑1 (MQ=255) aaGACTTTTTGAGCGAATTTCGGCGCTTGTGGCCTGTAATAATTGCTATTACTAACCt > 2:897419/1‑58 (MQ=255) aaGACTTTTTGAGCGAATTTCGGCGCTTGTGGCCTGTAATAATTGCTATTACTAACCt < 1:897419/58‑1 (MQ=255) aGACTTTTTGAGCGAATTTCGGCGCTTGTGGCCTGTAATAATTGCTATTACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGCAAAAGAACGATTTGACCAGGCTCGGCAAttt > 2:49727/1‑134 (MQ=255) tGAGCGAATTTCGGCGCTTGTGGCCTGTAATAATTGCTATTACt < 1:591954/44‑1 (MQ=255) tGAGCGAATTTCGGCGCTTGTGGCCTGTAATAATTGCTATTACt > 2:591954/1‑44 (MQ=255) cggcgctccttaaccggtgaTACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCAtt < 2:433689‑M2/46‑1 (MQ=255) cggcgctccttaaccggtgaTACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCAtt > 1:433689‑M2/21‑66 (MQ=255) ctccttaaccggtgaTACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGCAAAAGAACGATTTGACCAGGCTCGGCAATTTCTGGATGCGACGCAAAGCGCCGAGCGCCAGttt > 2:114277‑M2/16‑134 (MQ=255) ccggtgaTACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGCAAAAGAACGATTTGACCAGGCTCGGCAATTTCTGGATGCGACGCAAAGCGCCGAGCGCCAGTTTCTTCATGt > 2:316127‑M2/8‑134 (MQ=255) ccggtgaTACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGCAAAAGAACGATTTGACCAGGCTCGGCAATTTCTGGATGCGACGCAAAGCGCCGAGCGCCAGTTTCTTCATGt > 2:660410‑M2/8‑134 (MQ=255) cggtgaTACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGCAAAAGAACGATTTGACCAGGCTCGGCAATTTCTGGATGCGACGCAAAGCGCCGAGCGCCAGTTTCTTCATGTc < 2:166921‑M2/128‑1 (MQ=255) ttACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGCaa < 2:53017/58‑1 (MQ=255) ttACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGCaa > 1:53017/1‑58 (MQ=255) TACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGCAAAAGAACGATTTGACCAGGCTCGGCAATTTCTGGAt > 2:967531‑M2/1‑92 (MQ=255) TACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGCAAAAGAACGATTTGACCAGGCTCGGCAATTTCTGGAt < 1:967531‑M2/92‑1 (MQ=255) TACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGCAAAAGAACGATTTGACCAGGCTCGGCAATTTCTGGATGCGACGCAAAGCGCCGAGCGCCAGTTTCTTCATGTCGTTCtt > 2:535275‑M2/1‑134 (MQ=255) | CCGGCGCCCAGATTGCACTTTGCAGCTCGCACAGCGGGTAAGCATCTACACTTAATAACTTATCCTTTTAGGATCTCTGTAAGACTTTTTGAGCGAATTTCGGCGCTTGTGGCCTGTAATAATTGCTATTACTAACCTTACTGAAAGTAATGTCACATAGCGGCATACTTGCATTCGGGCTGGCAAAAGAACGATTTGACCAGGCTCGGCAATTTCTGGATGCGACGCAAAGCGCCGAGCGCCAGTTTCTTCATGTCGTTCTT > AY305378/436187‑436449 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |