Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ AM260480 2677902 2677905 4 2 [0] [0] 2 fliK1 flagellar hook‑length control protein

TGCCGGCGCACGCGCGTTGCCCGGCATCCGCCAGGAGCCGCAGGCGCAAGTACCGGTGCCGGCCCGGGCGGCTGCCCCAGGCGGCACTGCGCAGGCCGCCGCAACCACGCTGCCGTCTGCGCTGCTGACCTATA  >  AM260480/2677768‑2677901
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tGCCGGCGCACGCGCGTTGCCCGGCATCCGCCAGGAGCCGCAGGCGCAAGTACCGGTGCCGGCCCGGGCGGCTGCCCCAGGCGGCACTGCGCAGGCCGCCGCAACCACGCTGCCGTCTGCGCTGCTGACCtata  >  1:698989/1‑134 (MQ=255)
 gCCGGCGCACGCGCGTTGCCCGGCATCCGCCAGGAGCCGCAGGCGCAAGTACCGGTGCCGGCCCGGGCGGCTGCCCCAGGCGGCACTGCGCAGGCCGCCGCAACCACGCTGCCGTCTGCGCTGCTGACCtata  <  2:698989/133‑1 (MQ=255)
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TGCCGGCGCACGCGCGTTGCCCGGCATCCGCCAGGAGCCGCAGGCGCAAGTACCGGTGCCGGCCCGGGCGGCTGCCCCAGGCGGCACTGCGCAGGCCGCCGCAACCACGCTGCCGTCTGCGCTGCTGACCTATA  >  AM260480/2677768‑2677901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: