| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | 3548678 = | 13 (0.480) | 8 (0.310) | 6/204 | 1.6 | 35.2% | coding (843/1002 nt) | h16_A3281 | conserved hypothetical protein |
| ? | AM260479 | 3548702 = | 17 (0.650) | coding (819/1002 nt) | h16_A3281 | conserved hypothetical protein | |||||
CACTCGCTGGAGGACCGCATCGTCAAGCGGTTCATGGCGGCGCACGCCCGTCCCCAGCAGGATGCCGACCCGGCGCTGCGGCGCGCGCCGCTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/3548773‑3548678‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcCGGGTCGGCATCCTGCTGGGGACGGGCGTGCGCCGCCATGAACCGCTTGACGAT > AM260479/3548702‑3548755 CACTCGCTGGAGGACCGCATCGTCAAGCGGTTCATGGCGGCGCACGCCCGTCCCCAGCAGGATGCCGACCCGGCGCTTCGGCGCGCGCCGCTGCGCCGGGTCGGCATCCTGCTGGGGACGGGCGTGCGCCGC > 1:1075783/1‑132CACTCGCTGGAGGACCGCATCGTCAAGCGGTTCATGGCGGCGCACGCCCGTCCCCAGCAGGATGCCGACCCGGCGCTGCGGCGCGCGCCGCTGCGCCGGGTCGGCATCCTGCTGGGGACGGGCGTGCGCCGC < 2:1075783/132‑1 GTCAAGCGGTTCATGGCGGCGCACGCCCGTCCCCAGCAGGATGCCGACCCGGCGCTGCGGCGCGCGCCGCTGCGCC > 1:836779/1‑76 GTCAAGCGGTTCATGGCGGCGCACGCCCGTCCCCAGCAGGATGCCGACCCGGCGCTGCGGCGCGCGCCGCTGCGCC < 2:836779/76‑1 CTGCGCCGGGTCGGCATCCTGCTGGGGACGGGCGTGCGCCGCCATGAACCGCTTGACGAT > 1:69942/1‑60 CTGCGCCGGGTCGGCATCCTGCTGGGGACGGGCGTGCGCCGCCATGAACCGCTTGACGAT > 1:821753/1‑60 CTGCGCCGGGTCGGCATCCTGCTGGGGACGGGCGTGCGCCGCCATGAACCGCTTGACGAT < 2:69942/60‑1 CTGCGCCGGGTCGGCATCCTGCTGGGGACGGGCGTGCGCCGCCATGAACCGCTTGACGAT < 2:821753/60‑1 CACTCGCTGGAGGACCGCATCGTCAAGCGGTTCATGGCGGCGCACGCCCGTCCCCAGCAGGATGCCGACCCGGCGCTGCGGCGCGCGCCGCTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/3548773‑3548678‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcCGGGTCGGCATCCTGCTGGGGACGGGCGTGCGCCGCCATGAACCGCTTGACGAT > AM260479/3548702‑3548755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |