New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	3756841 =	17 (0.630)	4 (0.160)	4/198	2.0	20.6%	coding (277/1230 nt)	h16_A3488	dienelactone hydrolase or related enzyme
	?	AM260479	3756900 =	15 (0.590)					coding (218/1230 nt)	h16_A3488	dienelactone hydrolase or related enzyme

CTACTACGCCGAGGAGGGCTATACGGTGCTGGTGCCCGACCTGTTCTGGCGCATCGCGCCCGGGATCGAGCTGACCGACCGCGGCGAGGACTTCCAGCGGGCGCTGGGCCTGTACCAGCAGTTCGACGAAGCCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AM260479/3756977‑3756841 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcggTCGGTCAGCTCGATCCCGGGCGCGATGCGCCAGAACAGGTCGGGCACCAGCACCGTATAGCCCTCCTCGGCGTAGTAGTCCGCCACCTGCCGCATGGTCGCGTTGACGCCGAAGATCTCCTGGCACAA  >  AM260479/3756900‑3757027                                                                                                                                                                                                                                                                           CTACTACGCCGAGGAGGGCTATACGGTGCTGGTGCCCGACCTGTTCTGGCGCATCGCGCCCGGGATCGAGCTGACCGACCGCGGCGAGGACTTCCAGCGGGCGCTGGGCCTGTACCAGCAGTTCGACGAAGCCG                                                                                                                                     <  2:31575/134‑1    CTACGCCGAGGAGGGCTATACGGTGCTGGTGCCCGACCTGTTCTGGCGCATCGCGCCCGGGATCGAGCTGACCGACCGCGGCGAGGACTTCCAGCGGGCGCTGGGCCTGTACCAGCAGTTCGACGAAGCCGCG                                                                                                                                   <  1:479176/133‑1                                                                                             TCCAGCGGGCGCTGGGCCTGTACCAGCAGTTCGACGAAGCCGCGGTCGGTCAGCTCGATCCCGGGCGCGATGCGCCAGAACAGGTCGGGCACCAGCACCGTATAGCCCTCCTCGGCG                                                          <  1:915072/117‑1                                                                                             TCCAGCGGGCGCTGGGCCTGTACCAGCAGTTCGACGAAGCCGCGGTCGGTCAGCTCGATCCCGGGCGCGATGCGCCAGAACAGGTCGGGCACCAGCACCGTATAGCCCTCCTCGGCG                                                          >  2:915072/1‑117                                                                                                                               CGAAGCCGCGGTCGGTCAGCTCGATCCCGGGCGCGATGCGCCAGAACAGGTCGGGCACC                                                                                  >  1:265812/1‑59                                                                                                                               CGAAGCCGCGGTCGGTCAGCTCGATCCCGGGCGCGATGCGCCAGAACAGGTCGGGCACC                                                                                  <  2:265812/59‑1                                                                                                                                    CCGCGGTCGGTCAGCTCGATCCCGGGCGCGATGCGCCAGAACAGGTCGGGCACCAGCACCGTATAGCCCTCCTCGGCGTAGTAGTCCGCCACCTGCCGCATGGTCGCGTTGACGCCGAAGATCTCCTGGCACAA  <  2:479176/134‑1                                                                                                                                      GCGGTCGGTCAGCTCGATCCCGGGCGCGATGCGCCAGAACAGGTCGGGCACC                                                                                  <  1:575849/52‑1                                                                                                                                      GCGGTCGGTCAGCTCGATCCCGGGCGCGATGCGCCAGAACAGGTCGGGCACC                                                                                  >  2:575849/1‑52                                                                                                                                                                                                                                                                           CTACTACGCCGAGGAGGGCTATACGGTGCTGGTGCCCGACCTGTTCTGGCGCATCGCGCCCGGGATCGAGCTGACCGACCGCGGCGAGGACTTCCAGCGGGCGCTGGGCCTGTACCAGCAGTTCGACGAAGCCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AM260479/3756977‑3756841 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcggTCGGTCAGCTCGATCCCGGGCGCGATGCGCCAGAACAGGTCGGGCACCAGCACCGTATAGCCCTCCTCGGCGTAGTAGTCCGCCACCTGCCGCATGGTCGCGTTGACGCCGAAGATCTCCTGGCACAA  >  AM260479/3756900‑3757027

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.