New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	3756841 =	17 (0.630)	4 (0.160)	4/198	2.0	20.6%	coding (277/1230 nt)	h16_A3488	dienelactone hydrolase or related enzyme
	?	AM260479	3756900 =	15 (0.590)					coding (218/1230 nt)	h16_A3488	dienelactone hydrolase or related enzyme

CCACGTCGGGCAGCCGGCAGGCCGCCAGGTAGGCCAGCTTGCCGCCCAGGCAGAAGCCCAGCACGCCGGTCTGGCCGACGCATTCCGGCCGCGCACGCAGCGCTTCAAGCGCGGCGCCCACATCCTGCACGCCCGCGGCTTCGTCGAACTGCTGGTACAGGCCCAGCGCCCGCTGGAAGTCCTCGCCGCGGTCGGTCAGCTCGATCCCGGGCGCGATGCGCCAGAACAGGTCGGGCACCAGCACCGTATAGCCCTCCTCGGCG  >  AM260479/3756709‑3756971                                                                                                                                     |                                                                                                                                   ccACGTCGGGCAGCCGGCAGGCCGCCAGGTAGGCCAGCTTGCCGCCCAGGCAGAAGCCCAGCACGCCGGTCTGGCCGACGCATTCCGGCCGCGCACGCAGCGCTTCAAGCGCGGCGCCCACATCCTGCACGccc                                                                                                                                   <  2:1086188/134‑1 (MQ=255)    cGTCGGGCAGCCGGCAGGCCGCCAGGTAGGCCAGCTTGCCGCCCAGGCAGAAGCCCAGCACGCCGGTCTGGCCGACGCATTCCGGCCGCGCACGCAGCGCTTCAAGCGCGGCGCCCACATCCTGCACGCCcgcg                                                                                                                                >  1:457104/1‑134 (MQ=255)     ttgtgccaggagatcttcggcgtcaacgcgaccatgcggcaggtggcggactactacgccgaggagggctatacggtgctggtgcccgacctgttctggcgcatcgcgcccgggatcgagctgaccgaCCGCgg                                                                                                                               <  2:479176‑M1/6‑1 (MQ=255)          gCAGCCGGCAGGCCGCCAGGTAGGCCAGCTTGCCGCCCAGGCAGAAGCCCAGCACGCCGGTCTGGCCGACGCATTCCGGCCGCGCACGCAGCGCTTCAAGCGCGGCGCCCACATCCTGCACGCCCGCGGCTtcg                                                                                                                          <  2:397345/134‑1 (MQ=255)          gCAGCCGGCAGGCCGCCAGGTAGGCCAGCTTGCCGCCCAGGCAGAAGCCCAGCACGCCGGTCTGGCCGACGCATTCCGGCCGCGCACGCAGCGCTTCAAGCGCGGCGCCCACATCCTGCACGCCCGCGGCTtcg                                                                                                                          <  2:273665/134‑1 (MQ=255)                   aGGCCGCCAGGTAGGCCAGCTTGCCGCCCAGGCAGAAGCCCAGCACGCCGGTCTGGCCGACGCATTCCGGCCGCGCACGCAGCGCTTCAAGCGCGGCGCCCACATCCTGCACGCCCGCGGCTTCGTCGAActgc                                                                                                                 >  1:314379/1‑134 (MQ=255)                    ggCCGCCAGGTAGGCCAGCTTGCCGCCCAGGCAGAAGCCCAGCACGCCGGTCTGGCCGACGCATTCCGGCCGCGCACGCAGCGCTTCAAGCGCGGCGCCCACATCCTGCACGCCCGCGGCTTCGTCGAActgct                                                                                                                <  2:314379/134‑1 (MQ=255)                                    aGCTTGCCGCCCAGGCAGAAGCCCAGCACGCCGGTCTGGCCGACGCATTCCGGCCGCGCACGCAGCGCTTCAAGCGCGGCGCCCACATCCTGCACGCCCGCGGCTTCGTCGAACTGCTGGTACAGGCCCAgcgc                                                                                                >  1:300924/1‑134 (MQ=255)                                                      aaGCCCAGCACGCCGGTCTGGCCGACGCATTCCGGCCGCGCACGCAGCGCTTCAAGCGCGGCGCCCACATCCTGCACGCCCGCGGCTTCGTCGAACTGCTGGTACAGGCCCAGCGCCCGCTGGAAGTCCTcgcc                                                                              >  2:110081/1‑134 (MQ=255)                                                             cgccgaggagggctatacggtgctggtgcccgacctgttctggcgcatcgcgcccgggatcgagctgaccgaCCGCGGCTTCGTCGAACTGCTGGTACAGGCCCAGCGCCCGCTGGa                                                                                        >  2:915072‑M1/73‑117 (MQ=255)                                                             cgccgaggagggctatacggtgctggtgcccgacctgttctggcgcatcgcgcccgggatcgagctgaccgaCCGCGGCTTCGTCGAACTGCTGGTACAGGCCCAGCGCCCGCTGGa                                                                                        <  1:915072‑M1/45‑1 (MQ=255)                                                                cGCCGGTCTGGCCGACGCATTCCGGCCGCGCACGCAGCGCTTCAAGCGCGGCGCCCACATCCTGCACGCCCGCGGCTTCGTCGAACTGCTGGTACAGGCCCAGCGCCCGCTGGAAGTCCTCGCCGcggtcggt                                                                     >  1:129403/1‑133 (MQ=255)                                                                                     ggtgcccgacctgttctggcgcatcgcgcccgggatcgagctgaccgaCcgc                                                                                                                                 <  1:575849‑M1/4‑1 (MQ=255)                                                                                     ggtgcccgacctgttctggcgcatcgcgcccgggatcgagctgaccgaCcgc                                                                                                                                 >  2:575849‑M1/49‑52 (MQ=255)                                                                                     ggtgcccgacctgttctggcgcatcgcgcccgggatcgagctgaccgaCCGCGGCTtcg                                                                                                                          <  2:265812‑M1/11‑1 (MQ=255)                                                                                     ggtgcccgacctgttctggcgcatcgcgcccgggatcgagctgaccgaCCGCGGCTtcg                                                                                                                          >  1:265812‑M1/49‑59 (MQ=255)                                                                                         ccGCGCACGCAGCGCTTCAAGCGCGGCGCCCACATCCTGCACGCCCGCGGCTTCGTCGAACTGCTGGTACAGGCCCAGCGCCCGCTGGAAGTCCTCGCCGCGGTCGGTCAGCTCGATCCCGGGCGCGATgcgc                                            >  2:28998/1‑133 (MQ=255)                                                                                                cgcaGCGCTTCAAGCGCGGCGCCCACATCCTGCACGCCCGCGGCTTCGTCGAACTGCTGGTACAGGCCCAGCGCCCGCTGGAAGTCCTCGCCGCGGTCGGTCAGCTCGATCCCGGGCGCGATGCGCCAGAACAg                                    <  2:129403/134‑1 (MQ=255)                                                                                                cgcaGCGCTTCAAGCGCGGCGCCCACATCCTGCACGCCCGCGGCTTCGTCGAACTGCTGGTACAGGCCCAGCGCCCGCTGGAAGTCCTCGCCGCGGTCGGTCAGCTCGATCCCGGGCGCGATGCGCCAGAACAg                                    <  1:982229/134‑1 (MQ=255)                                                                                                           aaGCGCGGCGCCCACATCCTGCACGCCCGCGGCTTCGTCGAACTGCTGGTACAGGCCCAGCGCCCGCTGGAAGTCCTCGCCGCGGTCGGTCAGCTCGATCCCGGGCGCGATGCGCCAGAACAGGTCGGGCAcc                          <  2:300924/133‑1 (MQ=255)                                                                                                           aaGCGCGGCGCCCACATCCTGCACGCCCGCGGCTTCGTCGAACTGCTGGTACAGGCCCAGCGCCCGCTGGAAGTCCTCGCCGCGGTCGGTCAGCTCGATCCCGGGCGCGATGCGCCAGAACAGGTCGGGCAcc                          <  1:110081/133‑1 (MQ=255)                                                                                                                      ccACATCCTGCACGCCCGCGGCTTCGTCGAACTGCTGGTACAGGCCCAGCGCCCGCTGGAAGTCCTCGCCGCGGTCGGTCAGCTCGATCCCGGGCGCGATGCGCCAGAACAGGTCGGGCACCAGCACCGTATAg              >  2:314284/1‑134 (MQ=255)                                                                                                                         caTCCTGCACGCCCGCGGCTTCGTCGAACTGCTGGTACAGGCCCAGCGCCCGCTGGAAGTCCTCGCCGCGGTCGGTCAGCTCGATCCCGGGCGCGATGCGCCAGAACAGGTCGGGCACCAGCACCGTATAGccc           <  1:28998/134‑1 (MQ=255)                                                                                                                                    cccGCGGCTTCGTCGAACTGCTGGTACAGGCCCAGCGCCCGCTGGAAGTCCTCGCCGCGGTCGGTCAGCTCGATCCCGGGCGCGATGCGCCAGAACAGGTCGGGCACCAGCACCGTATAGCCCTCCTCGGCg  >  2:366270/1‑132 (MQ=255)                                                                                                                                     |                                                                                                                                   CCACGTCGGGCAGCCGGCAGGCCGCCAGGTAGGCCAGCTTGCCGCCCAGGCAGAAGCCCAGCACGCCGGTCTGGCCGACGCATTCCGGCCGCGCACGCAGCGCTTCAAGCGCGGCGCCCACATCCTGCACGCCCGCGGCTTCGTCGAACTGCTGGTACAGGCCCAGCGCCCGCTGGAAGTCCTCGCCGCGGTCGGTCAGCTCGATCCCGGGCGCGATGCGCCAGAACAGGTCGGGCACCAGCACCGTATAGCCCTCCTCGGCG  >  AM260479/3756709‑3756971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.