| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | 202081 = | 24 (0.840) | 5 (0.220) | 5/172 | 1.6 | 23.0% | coding (583/1668 nt) | h16_B0178 | hemolysin activation/secretion protein |
| ? | AM260480 | 202101 = | 14 (0.610) | coding (563/1668 nt) | h16_B0178 | hemolysin activation/secretion protein | |||||
GCCAAGGTGACGGTCACAGGCAAGGCGGGCCCGGCAGAGGGCCGGCTGCGCGCCATTGCCGAGAAGCTGCAGCAGGACCGCCCGCTGCGCCAGGACCGCTTCGAACACTACGTCAATGCACTGGCCCTGCAGCCCGGGCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/202225‑202081‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcagcccgggctgcaggGCCAGTGCATTGACGTAGTGTTCGAAGCGGTCCTGGCGCAGCGGGCGGTCCTGCTGCAGCTTCTCGGCAATGGCGCGCAGCCGGCCCTCTGCCGGGCCCGCCTTGCCTGTGACCGT > AM260480/202101‑202216 GCCAAGGTGACGGTCACAGGCAAGGCGGGCCCGGCAGAGGGCCGGCTGCGCGCCATTGCCGAGAAGCTGCAGCAGGACCGCCCGCTGCGCCAGGACCGCTTCGAACACTACGTCAATGCACTGGCCCTGCAGCC > 1:172458/1‑134 AGGCGGGCCCGGCAGAGGGCCGGCTGCGCGCCATTGCCGAGAAGCTGCAGCAGGACCGCCCGCTGCGCCAGGACCGCTTCGAACACTACGTCAATGCACTGGCCCTGCAGCCCGGGCTGCAGGGCCAGTGCATT < 2:578967/134‑1 GCTGCAGCAGGACCGCCCGCTGCGCCAGGACCGCTTCGAACACTACGTCAATGCACTGGCCCTGCAGCCCGGGCTGCA > 1:813447/1‑78 GCTGCAGCAGGACCGCCCGCTGCGCCAGGACCGCTTCGAACACTACGTCAATGCACTGGCCCTGCAGCCCGGGCTGCA < 2:813447/78‑1 TGCAGCAGGACCGCCCGCTGCGCCAGGACCGCTTCGAACACTACGTCAATGCACTGGCCCTGCAGCCCGGGCTGCAGGGCC > 1:600639/1‑81 TGCAGCAGGACCGCCCGCTGCGCCAGGACCGCTTCGAACACTACGTCAATGCACTGGCCCTGCAGCCCGGGCTGCAGGGCC < 2:600639/81‑1 GCAGGACCGCCCGCTGCGCCAGGACCGCTTCGAACACTACGTCAATGCACTGGCCCTGCAGCCCGGGCTGCAGGGCCAGTGCATTGACGTAGTGTTCG > 1:962741/1‑98 CGAACACTACGTCAATGCACTGGCCCTGCAGCCCGGGCTGCAGGGCCAGTGCATTGACGTAGTGTTCGAAGCGGTCCTGGCGCAGCGGGCGGTCCTGC > 2:962741/1‑98 CGAACACTACGTCAATGCACTGGCCCTGCAGCCCGGGCTGC > 1:783488/1‑41 CCTGCAGCCCGGGCTGCAGGGCCAGTGCATTGACGTAGTGTTCGAAGCGGTCCTGGCGCAGCGGGCGGTCCTGCTGCAGCTTCTCGGCAATGGCGCGCAGCCGGCCCTCTGCCGGGCCCGCCTTGCCTGTGACC > 2:1069666/1‑134 TGCAGCCCGGGCTGCAGGGCCAGTGCATTGACGTAGTGTTCGAAGCGGTCCTGGCGCAGCGGGCGGTCCTGCTGCAGCTTCTCGGCAATGGCGCGCAGCCGGCCCTCTGCCGGGCCCGCCTTGCCTGTGACCGT > 1:479224/1‑134 GCAGCCCGGGCTGCAGGGCCAGTGCATTGACGTAGTGTTCG > 2:783488/1‑41 CCCGGGCTGCAGGGCCAGTGCATTGACGTAGTGTTCGAAGCGGTCCTGGCGCAGCGGGCGGTCCTGCTGCAGCTTCTCGGCAATGGCGCGCAGCCGGCCCTCTGCCGGGCCCGCCTTGCCTGTGACCG < 1:1077407/128‑1 CCCGGGCTGCAGGGCCAGTGCATTGACGTAGTGTTCGAAGCGGTCCTGGCGCAGCGGGCGGTCCTGCTGCAGCTTCTCGGCAATGGCGCGCAGCCGGCCCTCTGCCGGGCCCGCCTTGCCTGTGACCG > 2:1077407/1‑128 GCCAAGGTGACGGTCACAGGCAAGGCGGGCCCGGCAGAGGGCCGGCTGCGCGCCATTGCCGAGAAGCTGCAGCAGGACCGCCCGCTGCGCCAGGACCGCTTCGAACACTACGTCAATGCACTGGCCCTGCAGCCCGGGCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/202225‑202081‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcagcccgggctgcaggGCCAGTGCATTGACGTAGTGTTCGAAGCGGTCCTGGCGCAGCGGGCGGTCCTGCTGCAGCTTCTCGGCAATGGCGCGCAGCCGGCCCTCTGCCGGGCCCGCCTTGCCTGTGACCGT > AM260480/202101‑202216 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |