New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	= 2512516	15 (0.530)	4 (0.150)	4/196	2.1	21.7%	coding (171/1254 nt)	h16_B2212	conserved hypothetical protein
	?	AM260480	= 2512524	15 (0.570)					coding (163/1254 nt)	h16_B2212	conserved hypothetical protein

GCAACCAGCCAGCCACGAACGCCAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AM260480/2512455‑2512516 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctggccATCAGCGCGGCCAGCGGCACCGGCCAGCTGGGCACGCTGGGAGCGTTGGCGTTCGTGGCTGGCTGGTTGCTGATCTACCGCGGCGTGCGGGTCTATTACGGCGTGCCGGCCCATCCCGCGGCGC  <  AM260480/2512524‑2512401                                                                                                                                                                                            GCAACCAGCCAGCCACGAACGCCAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCCATCAGCGCGGCCAGCGGCACCGGCCAGCTGGGCACGCTGGGAGCGTTGGCGTTCGTGGCTGGCTGGTTGCT                                                       >  2:70598/1‑133                                         CAGCTGGCCGGTGCCGCTGGCCATCAGCGCGGCCAGCGGCACCGGCCAGCTGGGCACGCTGGGAGCGTTG                                                                              >  1:152236/1‑70                                         CAGCTGGCCGGTGCCGCTGGCCATCAGCGCGGCCAGCGGCACCGGCCAGCTGGGCACGCTGGGAGCGTTG                                                                              <  2:152236/70‑1                                                     GCCGCTGGCCATCAGCGCGGCCAGCGGCACCGGCCAGCTGGGCACGCTGGGAGCGTTGGCGTTCGTGGCTGGCTGGTTGCTGATCTACCGCGGCGTGCGGGTCTATTACGGCGTGCCGGCCCATCCCGCGGCGC  >  2:26407/1‑134                                                                                                                                                                                            GCAACCAGCCAGCCACGAACGCCAACGCTCCCAGCGTGCCCAGCTGGCCGGTGCCGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AM260480/2512455‑2512516 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctggccATCAGCGCGGCCAGCGGCACCGGCCAGCTGGGCACGCTGGGAGCGTTGGCGTTCGTGGCTGGCTGGTTGCTGATCTACCGCGGCGTGCGGGTCTATTACGGCGTGCCGGCCCATCCCGCGGCGC  <  AM260480/2512524‑2512401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.